Halobacterium litoreum: LT972_08695
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Entry
LT972_08695 CDS
T07867
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlu
Halobacterium litoreum
Pathway
hlu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT972_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_08695
Transcription machinery [BR:
hlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LT972_08695
Prokaryotic type
Archaeal type
TFB
LT972_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
GFA
DUF7129
Zn_ribbon_tTFIIB
Sigma70_r4
Trm112p
Cas12f1-like_TNB
DZR
HTH_Tnp_ISL3
Ribosomal_L37ae
IBR
Cyclin_N
Auto_anti-p27
Zn_ribbon_Nudix
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UHH12233
LinkDB
All DBs
Position
1587973..1588947
Genome browser
AA seq
324 aa
AA seq
DB search
MSDTKLRTYSGEQQQTETNRETESNAETHTCPECGGRVVNDEEHGESVCTECGLVVEEDG
IDRGPEWRAFDSKEKDQKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGNSLSSNQRQKMQR
LRKWNERFRTRNSKERNLKQALGEIERMASALGLPKEVRETASVIYRRALDEDLLPGRSI
EGVATSALYASARQMQTPRSIDEVANVSRIDEMEFKRTYRYIVRELGLEVAPADPASYVP
RFASELDLPDEVERRARELLSNAQEAGVTSGKSPVGLAAAAIYASSLLTNHKVTQSEVSD
VTDVSEVTIRNRYQELLEATEVAA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacaaaacttcgcacctacagcggcgagcagcagcagacggagacgaatcga
gagacggagtcgaacgccgagacccacacctgtcccgagtgtggcgggcgcgtcgtcaac
gacgaggagcacggcgagtccgtctgtaccgagtgtggcctcgtggtcgaggaggacggc
atcgaccgcgggcccgagtggcgcgccttcgactccaaggagaaagaccagaagtcccgc
gtcggcgccccgaccacgaacatgatgcacgacaaggggctctcgacgaacatcggctgg
cagaacaaggacgcctacggcaacagcctctcgtccaatcagcgccagaagatgcagcgc
ctgcgcaagtggaacgagcgcttccgcacgcgcaacagcaaggagcgcaacctcaagcag
gccctcggcgaaatcgaacgcatggcctccgcgctcggcctcccgaaggaggtacgcgag
acggcctcggtcatctaccgccgcgcgctcgacgaggacctgctgcccggccgctccatc
gagggcgtcgcgaccagcgccctctacgcgtcggcccgccagatgcagacgccgcgctcc
atcgacgaggtggcgaacgtcagccgcatcgacgagatggagttcaagcgcacgtaccgc
tacatcgtgcgcgaactcggtctggaagtcgcgcccgccgaccccgcgagttacgtgccc
cggttcgcgtccgaactcgacctcccggacgaggtcgagcgacgcgcccgcgaactcctc
agtaacgcacaggaggccggcgtcaccagcgggaagtccccggtcggcctcgccgccgcg
gccatctacgcgtccagcctcctcaccaaccacaaggtgacccagagcgaggtcagcgac
gtgaccgacgtgagcgaggtcaccatccggaaccgctaccaggaactcctcgaagcgacc
gaggtcgccgcgtaa
DBGET
integrated database retrieval system
