Halobacterium litoreum: LT972_10930
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Entry
LT972_10930 CDS
T07867
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hlu
Halobacterium litoreum
Pathway
hlu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
LT972_10930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_10930
03019 Messenger RNA biogenesis [BR:
hlu03019
]
LT972_10930
Transcription machinery [BR:
hlu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
LT972_10930
RNA polymerase I system
LT972_10930
Messenger RNA biogenesis [BR:
hlu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
LT972_10930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
KOW4_SPT5
DUF6093
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
UHH12670
LinkDB
All DBs
Position
1988534..1988971
Genome browser
AA seq
145 aa
AA seq
DB search
MGVYAVKTTASQEQTVASMIANREEDEIHAVLAPDALTSYVMVEADDDAVITRVMEEIPH
ARSLVPGMSSISEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtctacgctgtgaagaccaccgcgagccaggagcagaccgtcgcgagcatgatt
gcgaaccgcgaagaggacgagattcacgcggtgctcgcgcccgacgcgctcaccagttac
gtgatggtcgaggcggacgacgacgccgtcatcacgcgcgtcatggaggagattccccac
gcccgcagcctcgtccccggcatgtcctccatctcggaggtcgagcacttcctctccccg
aaaccggacgtcgagggcatcgcggagggcgacatcgtggaactcatcgccggcccgttc
aagggcgagaaagcgcaggtccagcgcatcgacgagggcaaagaccaggtcaccgtcgaa
ctgtacgaggcgaccgtcccgattcccgtgacggttcgcggcgaccagattcgcgtgctg
gactcggaagaacggtaa
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