Halobacterium litoreum: LT972_11220
Help
Entry
LT972_11220 CDS
T07867
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlu
Halobacterium litoreum
Pathway
hlu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT972_11220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_11220
Transcription machinery [BR:
hlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LT972_11220
Prokaryotic type
Archaeal type
TFB
LT972_11220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
Sigma70_r4
Auto_anti-p27
Zn_ribbon_RPB9
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UHH12727
LinkDB
All DBs
Position
2044890..2045843
Genome browser
AA seq
317 aa
AA seq
DB search
MTDARMRSREQERTDETETTDGCPECGGLVVNDEEHGESVCADCGLVVEEDGIDRGPEWR
AFDSKEKDQKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLSSNQRQKMQRLRKWNERF
RTRDAKERNLKQALGEIDRMASAQGLPDNVRETASVIYRRALEDDLLPGRSIEGVATSCV
YAAARQAGVPRSLDEIADVSRVEKAEIARTYRYVVRELGLEVAPADPESYVPRFASDLGL
SDEASHRARELLKTAKNKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSEVADISEVT
IRNRYHELLEAEDTIPV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcacgcatgcgttcccgagagcaggagcgcacggacgaaacggagacgacc
gacggctgcccggagtgtggcggcctcgtcgtcaacgacgaagagcacggcgagtcggtg
tgtgccgactgcggcctcgtggtcgaggaggacggcatcgaccgcgggcccgagtggcgc
gccttcgactccaaggagaaagaccagaagtcccgcgtcggcgcacccacgacgaacacg
atgcacgacaaggggctgtccacgaacatcgactggcgcgacaaggacgcctacggcaac
tcgctgtcctcgaaccagcgccagaagatgcagcgtctccgcaagtggaacgagcgcttc
cgcacccgcgacgccaaggagcgcaacctcaagcaggccctcggcgaaatcgaccggatg
gcctccgcgcagggcctgccggacaacgtccgcgagacggcctcggtcatctaccgccgc
gcgctcgaagacgacctgctgcccggccgctccatcgagggcgtcgcaacctcctgcgtg
tacgccgccgcccgacaggccggcgtcccgcgctccctcgacgaaatcgccgacgtgagc
cgcgtcgagaaagccgaaatcgcgcgcacctaccgctacgtcgtgcgcgaactcggcctc
gaagtcgcgcccgccgaccccgagagttacgtcccgcgcttcgcctccgacctcggcctc
tcggacgaggccagccaccgcgcccgcgaactcctcaagaccgcgaagaacaagggcgtc
cactccggcaagtcgccggtcggcctcgccgccgccgccgtctacgccgccgccctcctc
accaacgagaagaccacgcaggcgaaggtctccgaggtcgcggacatctccgaagtcacg
attcggaaccgctaccacgagctcctcgaagccgaggacacgattccggtttag
DBGET
integrated database retrieval system
