Halobacterium litoreum: LT972_11515
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Entry
LT972_11515 CDS
T07867
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlu
Halobacterium litoreum
Pathway
hlu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LT972_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_11515
Transcription machinery [BR:
hlu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LT972_11515
Prokaryotic type
Archaeal type
TFB
LT972_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Zn_ribbon_IS1595
Lar_restr_allev
Zn_ribbon_8
Zn_Ribbon_YjdM
Zn_ribbon_3
zf-tcix
Sigma70_r4
Cyclin_C
Zn_ribbon_PaaD
Zn_ribbon_LysW
Cas12f1-like_TNB
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
UHH12785
LinkDB
All DBs
Position
2098580..2099542
Genome browser
AA seq
320 aa
AA seq
DB search
MTRSTRQRERETATEQEESEEGVRECPECGSDNLVKSSDRAELVCDDCGLVVEEEQIDPG
PEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVA
TSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRFCS
ELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIHG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacacggtccactcgccagcgggagcgagaaacagcgacagagcaggaggagtccgag
gagggggtacgggagtgcccggagtgcggctctgacaacctcgtgaagagttcggaccgc
gcggaactggtctgtgacgactgtggtctcgtcgtcgaggaagaacagatagaccccggt
ccggagtggcgcgcgttcaaccaccaggaacgacaggagaagtcccgcgtcggcgcgccg
acgacgcagacgatgcacgacaagggactgacgaccaccatcgactggaaggacaaggac
gcctacggccggtctatctcgtcgaagaagcgctcgcagatgcaccgcctgcgcaagtgg
caggaacgcatccgcaccaaggacgccggggagcgcaacctccagttcgcgctctccgaa
atcgaccggatggcctccgcgctcggcgtaccgcgctccgtgcgcgaggtcgcctcggtc
atctaccggcgcgcgctcaaggaagacctcatccgaggtcgctccatcgagggcgtcgcc
acgagcgcgctgtacgcggcgtgccggaaggaaggcatcccgcgcagcctcgaggagatt
tcggaggtgtcccgagtcgagcgaaaggaaatcggccgaacgtaccgctacatctcccag
gaactcggcctggagatgaaaccggtcgacccgaagaagtacgtgccgcgcttctgctcg
gagctcgaactctccgaggaggtccagtcgaaagccaacgaaatcatcgagaccaccgcc
gagaaggggctgctctccggaaagtccccgaccggctacgccgccgcagcaatctacgct
gcctcactgctctgcaacgagaagaagacccaacgcgaggtcgcggacgtcgcgcaggtg
acggaagtcaccatccggaaccggtaccaggagcagatcgaagcgatgggcatccacggg
tag
DBGET
integrated database retrieval system
