Halobacterium litoreum: LT972_11610
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Entry
LT972_11610 CDS
T07867
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hlu
Halobacterium litoreum
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlu03016
]
LT972_11610 (truD)
Enzymes [BR:
hlu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LT972_11610 (truD)
Transfer RNA biogenesis [BR:
hlu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LT972_11610 (truD)
Prokaryotic type
LT972_11610 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UHH12801
LinkDB
All DBs
Position
2116551..2117855
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AA seq
434 aa
AA seq
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MREAHELERAVGMEYYASDADGTGGRLRDSPEDFRVTEIEDFDTQPVDADAGDYPWLVVR
ATLLRWDTNDFARAFANAVGMSRERVTWAGTKDRHAVTTQLFAVRDLDPEQVPEIADADV
EVVGRAGRGLQFGDLAGNEFRIVVRDPERPEQVDEISAELAEFAGGDPAVPNFFGQQRFG
SKRPITHEVGLAILRDDWEGAAMAYLGRPTEHEPEDSQRAREYVEETRDWTGALEEFPQR
LRYERTMLHELADGGSFRDAVETFPSNLQRLFVNAAQSYAFNLMLSERLERGLPFHEPVA
GDVVWFAEADAPEGVARPDPSREQRVTESRVDVMARHCERGRAFVTAPLVGTETEFADGE
PGDIERSVLSDLDLAPGDFDLPGDFDSQGTRRAVLLRPDLAVERDPLTFEFALPSGSYAT
VVLREYLKPSPLEL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacacgaactggagcgcgccgtcgggatggagtactacgcgagcgacgcc
gacggcaccggcggccgcctccgggactcgcccgaggacttccgcgtcaccgaaatcgag
gacttcgacacccagcccgtggacgcggacgccggcgactacccgtggctcgtcgtgcgc
gcgacgctcctccggtgggacaccaacgacttcgcccgggcgttcgcgaacgccgtcggg
atgagccgcgagcgcgtgacgtgggcggggacgaaagaccgccacgccgtcaccacccag
ttgttcgcggtgcgcgacctcgaccccgagcaggtgcccgagattgccgacgccgacgtc
gaggtcgtgggtcgggcgggccgcggcctccagttcggcgacctcgcgggcaacgagttc
cgcatcgtcgtgcgcgaccccgagcgccccgagcaggtggacgaaatttcggcggagctc
gcggagttcgcgggcggcgacccagccgtacccaatttcttcggccagcagcgcttcggg
agcaagcgccccatcacccacgaggtagggctcgcgattctgcgcgacgactgggagggc
gcggcgatggcgtacctcgggcggccgaccgaacacgagcccgaggactcccagcgagcg
cgagagtacgtcgaagagacgcgggactggacgggcgcgctggaggagttcccgcagcga
ctgcgctacgagcgcacgatgctccacgaactcgcggacggcgggagcttccgggacgcc
gtcgagacgttcccgtcgaacctccagcggctgttcgtgaacgccgcgcagtcctacgcg
ttcaatctgatgctctccgagcgcctcgaacgcggcctgccgttccacgaacccgtcgcg
ggcgacgtggtgtggttcgcggaagccgacgcgccagagggcgtcgcgcgccccgacccg
agtcgggaacagcgcgtcaccgagtcgcgggtggacgtgatggcgcggcactgcgagcgc
ggccgggcgttcgtcaccgcgccgctcgtcgggacggagacggagttcgcggacggcgag
ccaggcgacatcgagcgttccgtcctctcggacctcgacctcgcgcccggagatttcgac
ctgcccggcgacttcgactcgcagggcacgcgccgggccgtcctgctccgccccgacctc
gccgtggagcgcgaccccctgaccttcgagttcgcgctcccctcggggagttacgcgaca
gtcgtcctccgagagtacctgaagccgagtccgctcgaactctga
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