Halobacterium litoreum: LT972_12210
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Entry
LT972_12210 CDS
T07867
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hlu
Halobacterium litoreum
Pathway
hlu00100
Steroid biosynthesis
hlu00909
Sesquiterpenoid and triterpenoid biosynthesis
hlu01100
Metabolic pathways
hlu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
LT972_12210
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
LT972_12210
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hlu01006
]
LT972_12210
Enzymes [BR:
hlu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
LT972_12210
Prenyltransferases [BR:
hlu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
LT972_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
UHH12918
LinkDB
All DBs
Position
complement(2230363..2231439)
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AA seq
358 aa
AA seq
DB search
MTTQHSRRGDAPDRTYCHRTVQDVSRTFALTVDQLAAPMADYVCVGYLLCRIPDTVEDTT
HVSPERRVALLETYRDALDPGTDTTADDFAAAVAPRIPDRRTRPDERDADWRLVADAPTV
LATFADFDPAVRAAMRPPILELVDGMTRFVDRYADEDGLRIQTDVELRSYCHYVAGTVGT
LVTNLLARQSLPAGRANALRTNAEHFGRLLQLVNVAKDVRDDYATERNVYLPADWLAAEG
VSQDRLLADENRSGVARVVERVVERAKSHRDGAEAYLQAMPLGDGNTVVAWALPYLLAVG
TLRELSKRPADAATDRPVKVSREEVAAVAAAVRDGGRESIPRLRETISRAPLHRADGA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacagcactcccggcgcggcgacgccccggaccgcacgtactgccaccgcacc
gtccaagacgtctcccggacgttcgcgctcaccgtcgaccagctcgcggcaccgatggcc
gactacgtctgcgtcggctacctcctctgtcgcatccctgacaccgtcgaggacaccacc
cacgtctcgcccgagcgtcgcgtcgccctcctggagacgtaccgggacgccctcgacccg
gggacggacacgaccgccgacgacttcgcggccgccgtcgcaccgcggattcccgaccgc
cggacgcgtcccgacgagcgcgacgccgactggcgcctcgtcgccgacgcgccgaccgtg
ctggcgaccttcgccgacttcgacccggcggtccgcgcggcgatgcgaccgccgatactg
gagttagtcgacgggatgacgcgcttcgtcgaccggtacgccgacgaggacggcctccgc
atccagacggacgtcgaactccggagttactgtcactacgtcgccggcaccgtcggcacg
ctcgtcacgaacctcctcgcccggcagtcgctcccggcaggccgcgcgaacgccctccgc
accaacgccgaacacttcgggcgcctcctccaactcgtgaacgtcgcgaaggacgtccgc
gacgactacgcgaccgaacggaacgtctacctgcccgccgactggctggccgccgagggc
gtctcacaggaccgactgctcgccgacgagaaccggtcgggcgtcgcgcgtgtcgtcgag
cgagtcgtcgaacgcgcgaaatcccaccgcgacggcgccgaggcgtacctgcaggcgatg
ccgctcggagacggcaacacggtcgtcgcgtgggcgctcccctacctcctcgccgtcggg
acgctcagggaactgtccaagcggccggccgacgccgccaccgaccgaccggtgaaagtg
tcccgcgaggaggtggccgcggtcgcggcggccgtccgcgacggcggccgcgagtcgatt
ccgcgcctccgggagacgatttcgcgcgcgcccctccaccgcgccgacggcgcgtga
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