Halobacterium litoreum: LT972_12535
Help
Entry
LT972_12535 CDS
T07867
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
hlu
Halobacterium litoreum
Pathway
hlu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LT972_12535 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_12535 (rpoB)
Enzymes [BR:
hlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LT972_12535 (rpoB)
Transcription machinery [BR:
hlu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LT972_12535 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_Ribbon_TF
zf_DPOE_2
Zn_ribbon_TOP3B
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UHH12976
LinkDB
All DBs
Position
2282575..2284401
Genome browser
AA seq
608 aa
AA seq
DB search
MSTEREAKVYVNGSLVGTHDDPEELAAQIREARRRGEVSEMVNVSVKERTGEVIVNADAG
RARRPLLVVEDGETLVTDEEMDALENGDIDFEDLVRAGKVEFIDAEEEEDILVGVDNDEL
TVDHTHLEIDPQLIFGIGAGMIPYPEHNASPRITMGAGMMKQSLGLPAANYRIRPDTRQH
LMHYPQKAMVDTQTTKQIGYNDRPAGQNFVVAVMSYEGFNIEDALVMNKGSVERALARSH
FFRTYEGEERRYPGGQEDRFEIPSDDVRGARGEDAYKHLDEDGLVNPETRVDENSVLLGK
TSPPRFLEEPEDMGGLSPQKRRETSVTMRSGEDGVVDTVTLMEGEDGSKLAKVSVRDERI
PELGDKFASRHGQKGVVGHLAPHEDMPFTQDGVVPDLVLNPHALPSRMTVGHVLEMLGGK
AGAMDGRSVDGTAFTGEDEDEIRGTLEDRGFMSSGKEVLYSGVSGEKIEAEIFVGTIFYH
KLYHMVSNKIHARSKGPVQVLTRQPTEGRAREGGLRVGEMERDTVIGHGAAMVLKERLLD
SSDREDVHVCGNCGMTAVENYEQRRVYCPNCEEETDVHSIEMSYAFKLLLDEMKALGIAP
RLELEDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggaacgcgaagccaaagtatacgtcaacggtagcctcgtcgggacgcacgac
gaccccgaggagctcgcagcacagattcgggaggcgcgacgccgcggagaggtctccgag
atggtgaacgtctccgtgaaggagcgcaccggcgaagtcatcgtgaacgcggacgcgggg
cgcgcccgccgtccgctgctcgtcgtggaggacggcgagacgctcgtaaccgacgaggag
atggacgccctggagaacggcgacatcgacttcgaggacctcgttcgcgcggggaaggtg
gagttcatcgacgccgaggaagaggaggacattctcgtcggcgtcgacaacgacgaactc
accgtcgaccacacccacctcgagatcgacccgcagctcatcttcggcatcggcgcgggg
atgattccgtaccccgagcacaacgccagtccgcgcattacgatgggcgcggggatgatg
aaacagagcctggggctgccggcggcgaactaccgcatccgcccggacacccgccagcac
ctcatgcactacccgcagaaggcgatggtggacacgcagaccaccaagcaaatcgggtac
aacgaccgcccggcgggacagaacttcgtcgtcgccgtgatgtcctacgaggggttcaac
atcgaggacgccctcgtcatgaacaagggctcggtcgagcgcgcgctcgctcgctcgcac
ttcttccgcacctacgagggcgaggagcgacgctaccccggcggtcaggaggaccgcttc
gagattccgagcgacgacgtgcgcggcgcacgcggcgaggacgcgtacaagcacttagac
gaggacggcctcgtcaaccccgagacgcgcgtcgacgagaacagcgtgttgctcgggaag
acgagtccgccgcggttcctcgaagagcccgaggacatgggcgggctcagcccgcagaag
cgacgcgagacctccgtcacgatgcgctcgggcgaggacggcgtcgtggacacggtgacg
ctgatggagggcgaggacggctcgaagctcgcgaaggtcagcgtgcgcgacgagcgcatc
cccgagttgggggacaagttcgcgagccgacacggccagaagggcgtcgtcggccacctc
gcgccccacgaggacatgccgttcacgcaggacggcgtcgtcccggacctggtcctgaac
ccgcacgcgctgccgtcccggatgacggtcggccacgtgcttgagatgctcggcgggaag
gcgggcgccatggacgggcggtccgtcgacggcaccgcgttcaccggcgaggacgaggac
gagattcgcggcacgctggaggaccgcggcttcatgtcctccgggaaggaagtgctgtac
tccggagtttcgggggagaagatcgaggccgaaatcttcgtcggcaccatcttctaccac
aagctctaccacatggtgtcgaacaagattcacgctcgctccaagggccccgtgcaggtg
ctcacgcgccagcccacggaggggcgcgcccgcgagggcggtctccgcgtcggggagatg
gaacgtgacaccgtcatcgggcacggcgccgcgatggtgctcaaggagcgcctgctcgac
tcctcggaccgcgaggacgtccacgtctgtgggaactgcggcatgaccgccgtggagaac
tacgagcagcgtcgagtctactgtccgaactgcgaggaggagacggacgtgcacagcatc
gagatgagttacgcgttcaagctgctgcttgacgagatgaaggcgctcggcatcgcgccg
cgcctcgaactggaggacgcagtatga
DBGET
integrated database retrieval system
