Halobacterium litoreum: LT972_12545
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Entry
LT972_12545 CDS
T07867
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hlu
Halobacterium litoreum
Pathway
hlu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LT972_12545 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlu03021
]
LT972_12545 (rpoA2)
Enzymes [BR:
hlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LT972_12545 (rpoA2)
Transcription machinery [BR:
hlu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LT972_12545 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
UHH12978
LinkDB
All DBs
Position
2287306..2288487
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AA seq
393 aa
AA seq
DB search
MTDAFEAIVEDTELPRRLKDRVLETIEGRDGVTESQAEEIAAAVEAQYLDTRVDPLDPVG
TVSAQSIGEPGTQMTMNTFHYAGVAEMDVTQGLPRLIELVDARKTPDTPVMNVFLEDEYA
EERERAHEVVWKLEATKILALGDISTNVADMVVRIDLNEDTLQERWPRVDNTTEIAGEIA
ETIEGSLGVKVTQEGTVLEFGPSEPSYRELLQLVEQLRDIVFKGIEDVSRVVIRREEMDD
GHEEFVLYTEGSAFKKALNIEGVDASRTTCNNIHEVHKTLGIEAAREAIIDETMTTLEEQ
GLGDVNIRHLMLVADIMTNDGTIESIGRHGISGNKDSVLARAAFEVTVNHLLDAAIYGEA
DDLDGVIENVIVGKPVRLGTGDVNLRMGAGKGD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccttcgaagccatcgtcgaagacacggagttgccgcgacgcctgaaagac
cgcgtcctcgagaccatcgagggccgggacggcgtcaccgagtcgcaggccgaggaaatc
gcggcggccgtcgaggcgcagtacctcgacacgcgcgtcgaccccctcgacccggtcggc
accgtctccgcgcagtccatcggggagccggggacgcagatgacgatgaacacgttccac
tacgcgggcgtcgcggagatggacgtgacacagggcctgccgcggctcatcgaactcgtg
gacgcgcggaagacgccggacacgccggtgatgaacgtgttcctcgaggacgagtacgca
gaggagcgcgagcgcgcccacgaggtcgtctggaagctggaggcgacgaagattctggcg
ctcggggacatctccacgaacgtcgcggacatggtcgtccgcatcgacctgaacgaggac
acgctccaggagcgctggccgcgggtcgacaacaccaccgaaatcgcgggcgaaatcgcc
gagaccatcgaggggagcctcggcgtgaaggtgacccaggagggcaccgttctggagttc
ggcccgagcgagccgtcctaccgcgaactgctccagctcgtcgagcagctccgggacatc
gtgttcaaaggcatcgaggacgtctcccgcgtcgtcatccgccgcgaggagatggacgac
gggcacgaggagttcgtcctctacaccgaggggtcggcgttcaagaaggcgctgaacatc
gagggcgtggacgcgtcgcggacgacgtgtaacaacatccacgaggtccacaagaccctc
ggcatcgaggcggcccgcgaggccatcatcgacgagacgatgaccaccctcgaggagcag
ggtctcggcgacgtgaacatccgccacctgatgttggtcgcggacatcatgaccaacgac
ggcaccatcgagtccatcggccggcacggcatctccggcaacaaggactccgtgctggcg
cgtgcggcgttcgaggtgacggtgaaccacctcctcgacgccgccatctacggggaggcc
gacgacctcgacggcgtcatcgagaacgtcatcgtcgggaagccggtgcggctcggcacc
ggggacgtgaacctccggatgggcgccggcaagggcgactga
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