Halobacterium litoreum: LT972_12825
Help
Entry
LT972_12825 CDS
T07867
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hlu
Halobacterium litoreum
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hlu03009
]
LT972_12825
Ribosome biogenesis [BR:
hlu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
LT972_12825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
AAA_16
AAA
RNA_helicase
Rad17
nSTAND3
AAA_22
AAA_33
AAA_29
Fer4_6
Fer4
AAA_24
NACHT
Fer4_7
Fer4_9
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
UHH13033
LinkDB
All DBs
Position
2337377..2339191
Genome browser
AA seq
604 aa
AA seq
DB search
MAEDSIAVVDLDRCQPDRCNYECSNYCPPNRTGKECITLRGEDAEDGDPDQVRISEEICL
GETCGICVEKCPFDAIEIINLPQELEDEPTHRYGENAFSLYGLPVPESGKVTGLLGPNGI
GKSTAVKILAGEITPNLGRHDDAPDWEEVIDEYRGTELQDYLAAVRDGDVNVARKPQYVD
QIPDQFDGTTRELLERTDERGVLDDLVDRLSIRPVIDQSIDSLSGGELQRVALAATLARD
ADFYFVDELTPYLDIGQRVTAARIVRELAEEEDKAVLVVEHDLAVLDLLADSIHVAYGEP
SVYGVVTPPKSVRNGINEYLRGYLDNENMRIRPEAIEFEEHAPRPASREETLVSYPDMAK
SYGEGEFSLSVDGGDVHRNEVLGVVGPNGIGKSTFAKLLAGDIEADGVDLDLGMDIAYKP
QYVEADQHMRVDAFLSSITDDFGSSYWKTEIGDPLQLDRIMEQNLTDLSGGERQRVAIAA
TLSKDADLYLLDEPSAHLDVEQRVLATRAIRRFAENRETTVMVIDHDIYMIDLLADRLMV
FDGEPAEQGHASTPQEMRSGMNEFLANLDVTFRRDENLGRPRINKPDSQLDKQQKRDGEY
YYTN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacagcatcgcggtcgtcgacctcgacaggtgtcagcccgaccgctgcaac
tacgagtgctcgaactactgcccgccgaaccgaacgggcaaggagtgcatcacgctccgc
ggcgaggacgccgaggacggcgaccccgaccaagtgcgcatcagcgaggagatttgcctc
ggggagacctgcgggatttgcgtcgagaagtgccccttcgacgccatcgaaatcatcaac
ctcccccaggagttggaggacgaacccacccaccgctacggcgagaacgcgttctcgctg
tacggcctgccggtgcccgagtccgggaaggtgacgggcctgctcgggccgaacggcatc
ggtaagtcgaccgcggtgaagattctcgcgggcgaaatcacgccgaacctcgggcgccac
gacgacgcgcccgactgggaggaggtcatcgacgagtaccgcgggacggaactccaggac
tacctcgcggcggtccgggacggcgacgtgaacgtcgcgcgcaagccccagtacgtcgac
cagattcccgaccagttcgacggcacgacgcgggaactgctcgaacgcacggacgagcgc
ggcgtcctcgacgacctcgtggaccgcctctcgattcggccggtcatcgaccagtccatc
gactcgctgtccggcggcgaactccagcgcgtcgcgctcgccgccaccttggcgcgggac
gcggacttctacttcgtggacgaactcacgccgtacctcgacatcggccagcgcgtcacc
gcggcgcgcatcgtccgcgaactcgccgaggaggaggacaaggccgtgctcgtcgtggaa
cacgacctcgcggtcctcgacctgctcgcggactccattcacgtcgcgtacggtgaaccc
tcggtgtacggcgtcgtcacgccgccgaagagcgtgcgcaacggcatcaacgagtacctc
cgcggctacctcgacaacgagaacatgcgcatccggccggaagccatcgagttcgaggag
cacgcgccccggccggcgagccgcgaggagacgctcgtctcctaccccgacatggccaag
tcctacggcgagggcgagttctcgctgtccgtggacggcggcgacgtccaccgcaacgag
gtgctgggcgtcgtcgggccgaacggcatcgggaagtcgacgttcgcgaaactgctcgcg
ggcgacatcgaggccgacggcgtcgacctcgacttggggatggacatcgcgtacaagccc
cagtacgtcgaggccgaccagcacatgcgcgtcgacgcgttcctctcctcgattacggac
gacttcgggtcgagttactggaagaccgaaatcggcgacccgctccaactcgaccgcatc
atggagcagaacctcacggacctctccggcggggagcgccagcgcgtcgccatcgccgcg
acgctctcgaaggacgccgacctctacctgctcgacgagccctcggcccacctcgacgtg
gaacagcgcgtcctcgcgacgcgcgccatccggcggttcgcggagaaccgcgagaccacc
gtgatggtcatcgaccacgacatctacatgatagacctgctcgcggaccgcctgatggtg
ttcgacggcgaacccgccgaacagggtcacgcgtccacgccacaggagatgcgctcgggc
atgaacgagttcctcgcgaacctcgacgttaccttccgccgcgacgagaacctcgggcgc
ccgcgcatcaacaagcccgacagccaactcgacaaacaacagaaacgcgacggcgagtac
tactacacgaactga
DBGET
integrated database retrieval system
