Halobacterium litoreum: LT972_14000
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Entry
LT972_14000 CDS
T07867
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hlu
Halobacterium litoreum
Pathway
hlu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LT972_14000 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlu03400
]
LT972_14000 (uvrB)
DNA repair and recombination proteins [BR:
hlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LT972_14000 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LT972_14000 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
DUF87
Motif
Other DBs
NCBI-ProteinID:
UHH13257
LinkDB
All DBs
Position
2561237..2563303
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AA seq
688 aa
AA seq
DB search
MSDASGPLQPDRPEADVPFRVDAPFDPAGDQPDAIEQLVAGFEDGARKQTLLGVTGSGKT
NTVSWAVEELQQPTLVVAHNKTLAAQLYEEFRNLFPDNAVEYFVSYYDYYQPEAYVEQTD
TYIDKDASINDEIDRLRHSATRSLLTRDDVIVVASVSAIYGLGDPSNYEEMSLRLERGQT
IEREELLSRLVDLNYERNDVDFTQGTFRVRGDTVEVFPMYGRYPVRVEFWGDEVDRMAKL
DPMEGTVESEEPAVLFHPAEHYSVPEDEMQAAIEEIREDMHRRVRHFERNGDMVAAQRIE
ERTTFDLEMMEEAGYCSGIENYSVYLSDREPGDAPYTLLDYFPDDFLTVIDESHRTVPQI
KGQYEGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTDRTLYVSATPSDYERDASEQV
VEQIVRPTHLVDPEISVTDATGQVEDLMERIEDRTERGERTLVTTLTKRMAEDLTEYLEE
AGVAVEYMHDETDTLERHELVRGLRLGEFDVLVGINLLREGLDIPEVSLVAILDADQQGF
LRSRTSLIQTMGRAARNVNGEVVLYADETTDAMEDAIEETKRRRRIQQEFNEEHDTTPTT
IDKAVSETNLPGAETDTSSVAGDGPEDEGEAALLVEELEDRMQEAANNLEFELAADIRDR
IRELREEYDLDGDTAEDPGGVAPEAEDW
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccagcggccccctccagccggacagaccggaggccgacgtgccgttccgc
gtggacgcgcccttcgacccggcgggcgaccagcccgatgccatcgaacaactggtcgcg
gggttcgaggacggcgcacggaaacagaccctgctcggcgtcacggggtccgggaagacg
aatactgtgtcgtgggccgtcgaggaactccagcagccgacgctcgtcgtcgcgcacaac
aagaccctcgccgcccaactctacgaggagttccggaatttgttcccggacaacgccgtg
gagtacttcgtctcctactacgactactaccagcccgaggcgtacgtcgaacagaccgat
acgtacatcgacaaggacgcgtccatcaacgacgaaatcgaccgcttgcggcactccgcg
acgcgctcgctgttgacgcgagacgacgttatcgtcgtcgcgtcggtgtcggccatctac
gggctgggcgacccgtcgaactacgaggagatgagcctgcgcctcgaacgcgggcagacc
atcgagcgcgaggaactgctctcccggctggtggacctgaactacgagcgcaacgacgtg
gacttcacgcaggggacgttccgcgtccggggtgacaccgtcgaggtgttcccgatgtac
ggccggtacccagttcgcgtggagttctggggcgacgaggtcgaccggatggcgaaactg
gacccgatggagggcaccgtcgagagcgaggagccggccgtcctcttccacccggcggaa
cactactccgtgcccgaggacgagatgcaggccgccatcgaggagattcgcgaggacatg
caccggcgggtgcggcacttcgagcgcaacggcgacatggtcgccgcccagcgcatcgag
gagcgcacaacgttcgacttggagatgatggaggaggcgggctactgctcgggcatcgag
aactactcggtctacctctcggaccgcgaacccggcgacgcgccctacacgctgctggac
tacttccccgacgacttcctcacggtcatcgacgagtcccaccgaaccgtcccccaaatc
aagggccagtacgagggcgacaagtcacggaaggattcgctcgtggagaacggcttccgc
ctgccgacggcctacgacaaccgcccgctgaccttcgaggagttcgaggagaagaccgac
cgcacgctgtacgtctccgcgacgccgagcgactacgagcgcgacgcctccgagcaggtc
gtcgagcaaatcgtccgccccacccacctcgtcgaccccgagatttccgtgaccgacgcc
accggccaggtcgaggacctgatggagcgcatcgaggaccgaaccgagcgcggcgagcgc
acgctcgtcacgacgctcacgaagcgcatggccgaggacctcacggagtacctcgaagag
gccggggtcgcggtcgagtacatgcacgacgagacggacacgctcgaacgccacgaactc
gtgcgcggcctgcgcctcggcgagttcgacgtgctcgtcggcatcaacctcctgcgtgag
ggactcgacatccccgaggtgtcgctcgtcgcgattctggacgccgaccagcaggggttc
ctgcggagcagaacgagtctcatccagacgatgggccgggctgctcggaacgtcaacggc
gaggtcgtgttgtacgccgacgagaccaccgacgcgatggaggacgccatcgaggagacg
aagcgccgccgccgcatccaacaggagttcaacgaggaacacgacacgacgccgacgacc
atcgacaaggcggtcagcgagacgaacctccccggcgcggagacggacacctcctccgtg
gctggcgacggccccgaggacgagggcgaggccgccctgctcgtcgaggaactcgaagac
cggatgcaggaggccgcgaacaacctcgagttcgaactcgcggcggacatccgcgaccgc
atccgggaactgcgcgaggagtacgacctcgacggcgacaccgccgaggaccccggcggc
gtcgcgccggaggccgaggactggtag
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