Haloarcula marismortui: pNG6123
Help
Entry
pNG6123 CDS
T00211
Symbol
tfbE
Name
(GenBank) transcription initiation factor IIB 5
KO
K03124
transcription initiation factor TFIIB
Organism
hma
Haloarcula marismortui
Pathway
hma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
pNG6123 (tfbE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
pNG6123 (tfbE)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
pNG6123 (tfbE)
Prokaryotic type
Archaeal type
TFB
pNG6123 (tfbE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
Cyclin_C
DZR_2
PHF5
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AAV44666
UniProt:
Q5V7C6
LinkDB
All DBs
Position
pNG600:99133..100065
Genome browser
AA seq
310 aa
AA seq
DB search
MVRTMTTRDIYETGFDEDVQTESSATQCPECDGRVTTNAVETICEDCGLVIEEQRIDHGP
EWRAYDADERERTGAPLTTARHDRGISTEIGHGTDAHGNELSGQKRRQLARMRREQTRGR
WRSKAERNLAHGLGEVRRLASALELSESIRDQACQLFRSAQSEDLLRGRSIEAIGAASIY
GTCRCNQHPLLLEDVVDAARVESARVTNAYRTLNRELELPAPPMRPTSFIPRLISALELD
HDIRRRANELAERAEGTTLTNGCQPSGVAAACVYLAAQEQGALITQSTVASAAEVSVVTL
RSRRDELQAI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaacgatgactaccagagacatctacgaaactggcttcgacgaagacgtccaa
acagagtcgagcgctacccagtgtccagagtgtgacggccgggtcactacgaatgcggtc
gaaacgatctgcgaggactgtggacttgttatcgaggaacaacgtatcgatcacgggccg
gagtggcgggcgtacgatgcagacgagcgcgagcgaacaggcgcaccactcactacagcc
cgtcacgatcgaggcatctcgaccgagatcggccacggaaccgacgcacacgggaacgaa
ctctctggtcagaaacgccggcagctggcccggatgcgacgtgagcagacccgtggtcgc
tggcggtccaaagcggaacggaatctcgcacacgggttgggcgaggtacgccggctggcg
agtgcgctcgagctctctgagtcgattcgtgaccaggcgtgccagctcttccggagcgct
cagagcgaggatctgcttcgaggcagatccatcgaagccatcggtgcagcgagtatctac
ggtacctgtcgatgtaaccaacacccgcttctcctcgaggatgtcgtcgacgccgcccga
gtcgagtccgctcgtgtcaccaacgcctaccgaacactgaatcgcgaattagagctccca
gcaccaccaatgcgcccgacgtcgttcattccacgcctgatctcggcgctggagttagac
cacgacattcgtcggcgcgcgaacgaactcgcagaacgcgccgaggggacaaccctcacg
aacggctgtcagccatcgggcgtcgcggccgcctgtgtctatctggctgcccaagagcag
ggcgcgttgattacccaatccaccgtcgcgtcggcagcagaggtgtcagtcgtgacgctc
cgaagccggcgagacgaactccaagcgatctga
DBGET
integrated database retrieval system
