Haloarcula marismortui ATCC 43049: rrnAC0016
Help
Entry
rrnAC0016 CDS
T00211
Symbol
tfbA
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
rrnAC0016 (tfbA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
rrnAC0016 (tfbA)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
rrnAC0016 (tfbA)
Prokaryotic type
Archaeal type
TFB
rrnAC0016 (tfbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
FtrD-like
Cyclin_N
Rcat_RNF216
Sigma70_r4
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AAV45101
UniProt:
Q5V5V1
LinkDB
All DBs
Position
I:complement(15396..16355)
Genome browser
AA seq
319 aa
AA seq
DB search
MERPTRQRDSEQEEREEESESTGQQTCPECESESISSDGGGELVCEDCGLVIEDENIDRG
PEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSLSSEKRSQMHRLRKW
QERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVA
TACLYAACRQEGIPRSLEEVSDVSRVEQKEIGRTYRYVAQELELKMEPVDPKQYVPRFAS
ELELSEEVQSKANEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGIH
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacggccgacgcgccagcgggattctgaacaggaggaacgcgaggaggagtccgag
agcacgggccagcagacctgccccgagtgtgagtcggagtccatatctagcgacggcggt
ggtgaactcgtctgcgaggactgtggcctcgtcatcgaggacgagaacatcgaccgcggg
ccggagtggcgggcgttcaatcactccgaacgccagtccaagtcacgcgtcggagccccc
acgacccagacgatgcacgacaaggggctgaccacacagatcgactggaaggacaaggac
gcctacggtcggtcactctcctcggagaagcggagtcagatgcaccgccttcgaaagtgg
caggagcgcatccgaaccaaggacgccggcgaacggaacctgcagttcgcactgtcggag
atcgaccgcatggcgagcgcactcggtgtcccccggtcggtccgggaagtcgcctcggtc
atctatcgacgggcgctcaacgaggacctcatccgcggtcgctccatcgagggcgtcgcc
accgcctgcctgtatgcggcctgtcgacaggaaggcatcccccgcagtctagaggaagtt
tcggatgtctcccgggtcgaacagaaggagatcggccggacgtatcgctacgtcgctcag
gaactcgaactgaagatggaaccggtcgaccccaagcagtacgtcccgcggtttgcctcc
gaactggaactttctgaggaagtccagtcgaaggccaacgaaatcatcgacaccaccgcc
gagcaagggctgctctcggggaaatcacccactggctacgccgccgcagccatctacgcc
gcttcgctgctgtgtaacgaaaagaagacccagcgcgaggtcgctgacgtggctcaggtg
acagaagtcaccatccggaaccggtatcaggagcagatcgaagcgatgggcatccactga
DBGET
integrated database retrieval system
