Haloarcula marismortui ATCC 43049: rrnAC0496
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Entry
rrnAC0496 CDS
T00211
Symbol
sirR
Name
(GenBank) transcription repressor
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
hma
Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hma03000
]
rrnAC0496 (sirR)
Transcription factors [BR:
hma03000
]
Prokaryotic type
Helix-turn-helix
Other families
rrnAC0496 (sirR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
HVO_A0261_N
MarR
MarR_2
TrmB
HTH_Crp_2
HTH_IclR
HTH_24
DUF2250
HTH_20
DtxR
Rrf2
CggR_N
GntR
Topoisom_bac
HTH_Cmi2_C
DUF7343
DUF7342
DnaD_N
HTH_13
HTH_27
Penicillinase_R
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AAV45519
UniProt:
Q5V4N3
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All DBs
Position
I:436614..437306
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AA seq
230 aa
AA seq
DB search
MLSAKMEDYLKAIYRLERDGDPPIAPSTIAEMLDVTAPTVTSMVEKLADRGLVEREKYKG
VQTTPEGETVALEIIRHHRLLETFLTEQLGYDWAEVHEEAEVLEHHISEEFERRVAAVLD
EPEFDPHGDPIPSDSLDPIDDESATALSEHGEGGRLEVARVRDRDPDELTYLSDAGITPG
TVLTIEEVAPIGMVTVQLESGSSVSLPDHIADAIQVRAPDTQGEDGVSQA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtgccaagatggaggattatctgaaggctatctatcgccttgagcgggacggc
gacccgccgattgctccgtctactatcgccgagatgctggacgttacggcaccgacggtc
accagtatggtcgagaagctggctgaccgcgggctggtcgaacgcgagaagtacaagggc
gtgcagacaacgccggaaggcgagacggtggcgctggagattatccgccaccaccgcctg
cttgagacgtttctcaccgagcagttggggtacgactgggccgaggtccacgaggaagcg
gaggtgctcgaacaccacatcagcgaggagttcgagcgacgggtcgcggcagtcctcgac
gaaccggagttcgacccccacggggacccgattcccagcgactcgctggaccccatcgac
gacgagtccgcgacggcgctgtcagaacacggcgaaggggggcgacttgaagttgcacgg
gtccgggaccgtgaccccgacgaactcacgtatctctccgacgccggcatcacgccgggg
accgtgctgactatcgaggaggttgcacccatcgggatggtgacagtccagctggagagc
gggtcgtcggtgtcgctcccggaccacatcgccgatgcgattcaggtccgcgcaccggat
acgcagggcgaagacggagtgagccaggcgtga
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