Haloarcula marismortui ATCC 43049: rrnAC0783
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Entry
rrnAC0783 CDS
T00211
Name
(GenBank) unknown
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hma
Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hma03016
]
rrnAC0783
Enzymes [BR:
hma01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
rrnAC0783
Transfer RNA biogenesis [BR:
hma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
rrnAC0783
Prokaryotic type
tRNA splicing ligases
rrnAC0783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AAV45771
UniProt:
Q5V3Y1
LinkDB
All DBs
Position
I:complement(676255..677718)
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AA seq
487 aa
AA seq
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MVLELTGEHTTARVMVDDESLVESGCREQIETLIDHPAFTEPVRIMPDTHWGAGAPIGFT
MPLSERVVPNIVGVDVGCGMAATNLGPQLPLEDAERERRVREAVPMGRSVHDYDDAVHFV
EAFPFERANRIFEQFDTAYAERFGEHIDPVEFDFNGYDGEYFESLCDRVLADQRQGMGYI
IKSAGTLGGGNHFVEFGQARESGDYWLVIHSGSRYLGKSVAEYWQSTATDRRTIGEIRDQ
LPEEYVEYLKFDPDTVESRDLYAWVTGGMGESYIRKDRLRRELDGKEIEDAFDALGQVQD
AIHSSDDEDRNTDLDWLEGREAHGYLVDMLFAQQYARWNRELMSDAVCDALGVDPVDRFQ
SIHNYIDFRDLTIRKGATPARDGQRLLVPFNMADGSIIARGKGNDEYHQTAPHGAGRVMS
RRQAHSEVDMDEFAEAMDGIYSESVIKGVRDEAPMAYKDADAILSAIQPTAEVVEYVDAV
HNLKATE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgaactgacgggcgaacacaccacagcacgggtgatggtcgacgacgaatcg
ctcgtcgagagcgggtgtcgggagcagatcgagacgctcatcgaccatccggcgttcact
gagccggttcgaatcatgccggacacgcactggggggccggcgcacctatcggctttacg
atgccgttgagcgagcgcgtcgtgccgaacatcgtcggcgtcgacgtggggtgtggaatg
gccgcgacgaaccttggcccgcaactcccgctagaagacgctgagcgcgagcgacgcgtc
cgcgaggcggtcccgatggggcggtcggtccacgactacgacgatgcggtccacttcgtc
gaagcgttcccgttcgagcgggccaaccgcatcttcgagcagttcgacacggcctacgcc
gagcggttcggcgaacacatcgaccccgtcgagttcgacttcaacggctacgacggagag
tacttcgagtcgctgtgtgaccgcgttctagctgaccagcgccagggcatggggtacatc
atcaagagcgcggggacgctgggcggcgggaaccacttcgtcgagttcggccaggcccgc
gagtcgggtgactactggctggtcatccacagcggttcccggtatctgggtaagtccgtc
gccgagtactggcagtcgacggcgacggaccgccgaacaatcggcgagatccgcgaccag
cttcccgaagagtacgtcgagtacctgaaattcgaccccgatacagtcgaatcccgcgac
ctctacgcctgggtcactggcggcatgggcgaatcctacatccggaaggaccgcctccgc
cgcgaactggacggcaaggagatcgaggacgccttcgacgcgctgggacaggttcaggat
gccatccacagcagcgacgacgaggaccgcaacacggacttagactggctggagggtcgc
gaggcccacggctacctcgtcgatatgctgttcgcccagcagtacgcccgctggaaccgc
gaactgatgagcgatgccgtctgtgacgcccttggcgtcgaccccgtcgaccgcttccag
tcgattcacaattacatcgacttccgtgacctcactattcgcaagggagcgacgcccgct
cgcgacggacagcggttgctggtcccgttcaacatggccgacgggtcgattatcgcacgc
gggaagggcaacgacgagtaccaccagacagcgccacacggtgcgggccgtgtgatgagc
cgccggcaggcccacagcgaggtcgatatggacgagttcgccgaagcgatggacggtatc
tactcggagtccgtcatcaaaggcgtccgggacgaagcgccgatggcgtacaaggacgcc
gacgcgatactctcggctatccagcccactgccgaggtcgtcgagtacgtcgacgccgtc
cataatctgaaggcaactgagtga
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