Haloarcula marismortui ATCC 43049: rrnAC0792
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Entry
rrnAC0792 CDS
T00211
Symbol
cdc48b
Name
(GenBank) cell division control protein 48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
rrnAC0792 (cdc48b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hma03019
]
rrnAC0792 (cdc48b)
03009 Ribosome biogenesis [BR:
hma03009
]
rrnAC0792 (cdc48b)
04131 Membrane trafficking [BR:
hma04131
]
rrnAC0792 (cdc48b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hma04147
]
rrnAC0792 (cdc48b)
Messenger RNA biogenesis [BR:
hma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
rrnAC0792 (cdc48b)
Ribosome biogenesis [BR:
hma03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
rrnAC0792 (cdc48b)
Membrane trafficking [BR:
hma04131
]
SNARE
SNARE associated proteins
Others
rrnAC0792 (cdc48b)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
rrnAC0792 (cdc48b)
Exosome [BR:
hma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
rrnAC0792 (cdc48b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
TIP49
AAA_33
AAA_22
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
IstB_IS21
AAA_7
AAA_28
Mg_chelatase
DUF815
AAA_3
ABC_tran
ATPase
Parvo_NS1
AAA_18
TsaE
AAA_11
Sigma54_activat
AAA_17
AAA_24
Zeta_toxin
PhoH
AAA_30
NB-ARC
SLFN-g3_helicase
AAA_lid_PRS2_C
bpMoxR
Bac_DnaA
ATPase_2
Vps4_C
ATP-synt_ab
GSK-3_bind
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
AAV45779
UniProt:
Q5V3X3
LinkDB
All DBs
Position
I:683516..685789
Genome browser
AA seq
757 aa
AA seq
DB search
MRLTVKPLKQKDAGRGLAAIDRAAMDELELENGDYIVLEGKQDSRAVARVWPGYPEDEGN
GIVRIDGQLRQEANVGIDDPVNIEKADVNPATSVTVALPQNLRVRGNVGPMIRNNLSGQA
VTQGQTVPVSFGLGPLSSMSGQKIPLKIAETEPSGTVVVTDSTDIQVSEMPAEQVHSGEG
APEASDTPDVTYEDIGGLDRELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGK
TLMAKAVANEIDAYFTTISGPEIMSKYYGESEEQLREVFDEASENAPAIVFIDEIDSIAP
KRGETQGDVERRVVAQLLSLMDGLEERGQVIVIGATNRVDDIDPALRRGGRFDREIEIGV
PDKKGRKEILQVHTRGMPLSEEINIENYAENTHGFVGADLATLTKESAMNALRRIRPELD
LESDEIDAEVLERLEISDKDFREAMKGIEPSALREVFVEVPDVTWDSVGGLEDTKERLRE
TIQWPLEYEDVFESMDLEAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISVKGPELLNKF
VGESEKGVREVFSKARENAPTVVFFDEIDSIAGERGGGTTDSGVGERVVSQLLTELDGIE
DMENVVVVATTNRPDLIDDALLRPGRLDRHVHVPVPDEEARRAIFQVHTRDKPLADGVDL
DELASRTDGYVGADIEAVAREASMAATREFINSVDPEDIGDSVSNVRVTMDHFEHALSEV
GPSVTEETRERYDEIEQRFDRAEPGVTDESTASRTFQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagactcactgttaaaccactcaaacagaaagacgctggccgaggcctcgcggctatc
gaccgcgccgcgatggacgaactcgaactcgagaacggcgactacatcgttctcgaaggg
aaacaggacagccgcgcagtcgcccgggtctggcccggttaccccgaggacgaagggaac
ggcatcgtccgtatcgacgggcagctccgccaggaagctaacgtcggcatcgacgacccc
gtcaacatcgaaaaggccgatgtcaaccccgcgacatcggtcaccgtcgcgctgccccag
aacctccgggttcggggcaacgtcgggccgatgattcgcaacaacctcagcgggcaggcc
gtcacgcagggccagacggttcccgttagcttcggtctcggaccgctttcctcgatgtcc
ggccagaagatcccgctgaagatcgcagagaccgagccctccggcacggtcgtcgtgacc
gactccacagacattcaggtcagcgagatgcccgccgagcaggtccacagcggcgagggc
gcacctgaagcgagcgacacgcccgatgtgacctacgaggacatcggcggcctcgaccgc
gaactcgaacaggtccgcgagatgatcgagctgccgatgcgccaccccgaactgttccaa
cagctcggcatcgagccgccgaagggcgtcctcctgcacggcccgcccggcacggggaag
acgctgatggccaaggccgtcgccaacgaaatcgacgcgtacttcaccactatctccggg
ccggagatcatgtcgaagtactacggcgaaagcgaggaacaactccgggaagtcttcgac
gaggcctccgagaacgcccccgctatcgtcttcatcgacgagatcgactccatcgccccg
aagcgtggcgagacccagggcgacgtggagcgccgcgtcgtcgcccagctgctcagcctg
atggacgggctcgaagagcgcggacaggtcatcgtcatcggcgcgaccaaccgcgtcgac
gatatcgaccccgccttgcgccgtggcggccgcttcgaccgcgagatcgaaatcggcgtc
ccggacaagaagggccgcaaggagatcctgcaggtccacacccgcgggatgcccctctcc
gaggagatcaacatcgagaactacgccgagaacacccacggcttcgtcggcgctgacctc
gcgaccctcacgaaagagagcgcgatgaacgccctccggcgcatccgacccgaactcgac
ctcgaatccgacgaaatcgacgccgaggtgctcgaacgcctggagatcagcgataaagac
ttccgcgaggcgatgaagggcatcgagccctccgcgctccgggaggtcttcgtcgaagtc
ccggacgtcacctgggactccgtcggtgggctcgaagacaccaaggaacggctccgggag
actatccagtggcccctcgagtacgaagacgtgttcgagtcgatggacctcgaagccgcg
aagggcgtgctgatgtacggtccgcccggcaccgggaagacgctgctagcgaaggctgtc
gccaacgaggcccagtccaacttcatctccgtgaaggggccagaactcctgaacaagttc
gtgggtgagtccgagaagggcgtccgcgaagtgttcagcaaggcccgcgagaacgccccg
accgtggtgttcttcgacgagatcgactccatcgccggcgaacgtggcggcggcacgacc
gactccggcgtcggcgaacgcgtcgtctcccagctcctgacggaactggacgggatcgag
gacatggagaacgtcgtggtcgtcgcgaccacgaaccggccggacctcatcgacgacgcg
ctcctgcgccccggccgactcgacaggcacgtccatgtgcccgtcccggacgaggaagcg
cgccgcgccatcttccaggtccacacccgcgacaagccgctggccgacggcgtcgacctc
gacgaactggccagccgcacggacggctacgtcggcgcggacatcgaagcggtcgcccgc
gaggcgtcgatggccgcgacccgggagttcatcaacagcgtggaccccgaggacatcggc
gacagcgtcagcaacgtccgcgtgacgatggaccacttcgagcacgcgctctctgaagtc
ggccccagcgtcaccgaggagacccgcgagcgctacgacgaaatcgagcagcgcttcgac
cgggccgaacccggcgtcactgacgagagcacggccagtcgcaccttccagtag
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