Haloarcula marismortui: rrnAC0832
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Entry
rrnAC0832 CDS
T00211
Symbol
phrB1
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hma
Haloarcula marismortui
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hma03400
]
rrnAC0832 (phrB1)
Enzymes [BR:
hma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
rrnAC0832 (phrB1)
DNA repair and recombination proteins [BR:
hma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
rrnAC0832 (phrB1)
Prokaryotic type
rrnAC0832 (phrB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AAV45814
UniProt:
Q5V3T8
LinkDB
All DBs
Position
I:complement(717158..718555)
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AA seq
465 aa
AA seq
DB search
MRLHWHRRDLRATDNAGLAAATPSDPVVPVFIFDTAVLDHAGPPRVAFMLDALDSLREWY
RDKGSDLVVAEGDPTSVLPELAAQHGAEKVTWGKDYSGLARERDAAVRQALDDADVAREA
VQNAVLHEPGEITTNDGDPYSVFTYFGRKWHDREKAAPYDPPSADTLADVDGDALPTLAD
LGFEEPEADVPAAGTEEARALLDDFLDENVYEYEERRDFPADECTSRLSAHLKFGTIGIR
EVYDRTQAAKEGTGGDRRDSVREFQSQLAWREFYTQVLFAHPHVVSSNYKSYENPIEWEN
DEELLQAWKDGDTGYPIVDAGMRQLRDEAYMHNRVRMIVASFLTKDLLIDWRHGYEWFRE
KLVDHDTANDNGGWQWAASTGTDAQPYFRIFNPMTQGEDYDPNAEYIKEYVPELRDAAPE
IIHDWNDCSLTQRRSAAPEYPDPVVDHSERREEALAMFERARGDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcactggcatcgccgtgatctccgggcaacggacaacgctggcctcgccgcg
gcgaccccatctgacccggtcgtcccggtattcattttcgacacggccgttctcgaccac
gccggcccgccccgggtcgcgttcatgcttgacgcgctcgacagtttgcgcgagtggtac
cgcgacaagggtagtgacctcgtcgttgccgagggcgaccccacatccgtcttgccagaa
ctggcagcccagcacggcgcagagaaggtcacttggggcaaggactactccgggctcgca
cgggaacgcgacgcagctgtccggcaagcgctcgacgacgccgacgtggcccgcgaggcc
gtccagaacgctgtattgcacgaaccgggcgagattacgacgaacgacggcgacccctac
agcgtcttcacctacttcggccggaagtggcacgaccgcgagaaggcggccccctacgac
cccccgtcggccgacacactggccgatgtcgacggcgacgcgctcccgacactggctgac
ctcggcttcgaggagccagaagcggacgtgcccgcagcaggaaccgaagaagcgcgcgcc
ctgcttgatgacttcctcgacgagaacgtctacgagtacgaggagcgacgggatttcccg
gccgacgaatgcacctcgcggctctcggcccatctgaagttcggaactatcggtattcgg
gaggtgtacgaccggacacaggctgccaaggaggggaccggcggcgaccgccgggactcc
gtccgggagttccagtcccagctggcctggcgggagttctacacacaggtactgtttgcc
catccacacgtcgtgagctcgaactacaaatcatacgagaaccccatcgagtgggagaac
gacgaagagctgttacaggcctggaaagacggcgatacgggctaccccatcgtcgacgct
gggatgcgacagctccgtgacgaggcgtacatgcacaaccgcgtccggatgatcgtcgcc
tccttcctcacgaaggacctgctcatcgactggcgacacggctacgagtggttccgggag
aaactggtcgatcacgacacggcaaacgacaacggtggctggcagtgggcggcctccacg
gggaccgacgcgcagccctatttccgcatcttcaatccgatgacacagggcgaagactac
gacccgaacgccgagtatatcaaggaatacgtcccggagctacgggacgctgcacccgag
atcatccacgactggaacgactgttccctcacacaacggcgcagcgccgcaccggagtac
ccggaccccgtcgtcgaccacagcgagcgccgggaggaggcgctggcgatgttcgagcgg
gccagaggagacgactag
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