Haloarcula marismortui ATCC 43049: rrnAC0861
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Entry
rrnAC0861 CDS
T00211
Symbol
tfeA
Name
(GenBank) transcription initiation factor IIE alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
rrnAC0861 (tfeA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
rrnAC0861 (tfeA)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
rrnAC0861 (tfeA)
Prokaryotic type
Archaeal type
TFE
rrnAC0861 (tfeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
DUF7129
DUF7576
Sigma70_r3
HypA
Zn_ribbon_8
Zn_ribbon_6
Zn_ribbon_LysW
NRDD
Zn_ribbon_TiaS
HVO_2753_ZBP
DUF7560
DZR
Cas12f1-like_TNB
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AAV45842
UniProt:
Q5V3R0
A0A4P8JXS7
LinkDB
All DBs
Position
I:744632..745162
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AA seq
176 aa
AA seq
DB search
MAFEELLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFQYEKIPEQLQEEMHRLLDGLEERREYERENEFYLCE
HCGIRFEFGEAMEFGFECPECGNQVETMENTRLVTAMENRLEELRDELNADVDVEA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggaactcttggaggaccccgtcatacagaaatacctccacgagctggtc
ggaccgaaagggatgccggtcgccgccgcgccgccggacggcgaagtgaccgacgaagaa
ctggccgaggagctcggactcgaactgaacgacgttcgccgagcgctatttattctctac
gagaacgacctcgcgacctatcgtcggctccgcgacgaggactccgggtggctcacgtac
ctctggacgttccagtacgagaagatccccgaacaactgcaagaggagatgcaccgcctg
ctcgacggcctcgaagagcgccgcgagtacgagcgggaaaacgagttctacctctgtgag
cactgcggtatccgcttcgagttcggcgaggcaatggagttcggcttcgagtgccccgaa
tgtggcaatcaagtcgagacgatggagaacacccgtctcgtcaccgcgatggagaatcgc
ctcgaggagcttagagacgaactgaacgctgacgtggacgtggaagcctga
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