Haloarcula marismortui ATCC 43049: rrnAC0914
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Entry
rrnAC0914 CDS
T00211
Symbol
trmB1
Name
(GenBank) sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hma
Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hma03000
]
rrnAC0914 (trmB1)
Transcription factors [BR:
hma03000
]
Prokaryotic type
Helix-turn-helix
Other families
rrnAC0914 (trmB1)
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Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_20
HTH_5
MarR_2
HTH_IclR
HTH_Cmi2_C
PF0610-like_N
DUF2250
Rrf2
TFIIE_alpha
HTH_24
HTH_9
Motif
Other DBs
NCBI-ProteinID:
AAV45889
UniProt:
Q5V3L3
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Position
I:complement(788924..789976)
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AA seq
350 aa
AA seq
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MSSDDLEASLEQVIARFNLGEYEISAYLAVLQHGELTASEISENTDIPQPRVYDTVRSLS
DVGLVELKESRPMKVLAIDPREAFEGIQDSLDDLVDDLSSRYTAPAREPEAVSLVKSRPT
ILRYLEDIIETAEYELTLSLTPALLERFEDRLASRRQSGIAIEILISPGVDAPDPARFDY
ESIATTVKARRGITTPVVAVADGNYSMYATRESVRGDTDRYGVIFNRSELGFLVSGFLNT
VLWTTAETIASDGEALPFPRRYGTIRRCISDLMTLDGEFYATIEGRDVETGDHRVIEGKV
DQASFSSNREVATLVVETADGPVEVGGQVAAFEDIEAYEIRIGTDEPPEN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgacgacttggaagcatcgctcgaacaggtaattgcgcggttcaatctcggc
gagtacgagatttcagcctacctggccgtgttgcaacacggcgagctgacagcgtcggag
atatcggagaacacggacattccacagccgcgggtgtacgatacggttcgaagcctcagc
gatgttgggctggtcgaactcaaggagtcccgaccgatgaaggtcctggctatcgacccg
cgggaagcgttcgagggcatacaggactcgcttgatgacctcgttgacgacctgtcctca
cgctacacggcacccgcccgagagcccgaagctgtttcgctcgtcaaatcacggccgacg
atactccggtacctcgaagacataatcgaaacggccgagtacgaactgacgctgtcgctg
accccggccctgttagagcggttcgaagacagactggcaagccggaggcagtccggcatc
gctatcgagatcctcatttcaccgggcgtcgacgctcccgacccggcgcggttcgattac
gaatccatcgcgaccacggtgaaggctcgtcgcggtatcacgacaccggtcgtcgctgtc
gccgatggaaactactcgatgtatgccacccgcgagagcgtccgcggtgacacggaccgg
tacggcgtcatcttcaatcggtcggaactcggatttctggtgtccgggtttcttaacacg
gtgctgtggacgactgccgaaacgattgccagtgacggcgaagcgctgccgttcccgcgc
cgctacgggacgatacggcgctgtatctctgatttgatgacactagatggggagttctac
gcgactatcgagggccgggacgtagagacgggcgaccaccgggtcatcgagggcaaagtg
gatcaggcgtcgttcagttcgaaccgcgaggtcgcgacgctggtcgttgaaacggccgat
gggccggtcgaggtcggtggacaggtcgctgcgttcgaggatatcgaggcgtacgagatc
cgaatcgggacggacgaaccgccagagaactga
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