Haloarcula marismortui: rrnAC1126
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Entry
rrnAC1126 CDS
T00211
Symbol
tfbH
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hma
Haloarcula marismortui
Pathway
hma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
rrnAC1126 (tfbH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
rrnAC1126 (tfbH)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
rrnAC1126 (tfbH)
Prokaryotic type
Archaeal type
TFB
rrnAC1126 (tfbH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_C
Anti-TRAP
A2L_zn_ribbon
Trm112p
Sigma70_r4
HTH_Tnp_ISL3
OrfB_Zn_ribbon
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AAV46081
UniProt:
Q5V321
LinkDB
All DBs
Position
I:complement(1005460..1006428)
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AA seq
322 aa
AA seq
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MSESTTRTSTRERDEKITESTEQEAVETCPECSGNVVTDTEHGETVCEDCGLVVEEDEID
RGPEWRAFNSAEKDRKSRVGAPTTNMMHDKGLSTNIGWQNKDAYGRSLSSEQRQKMQRLR
TWNERFRTRDSKERNLKQALGEIDRMASALGLPQNVRETSSVIYRRALGDDLLPGRSIEG
VATAALYAAARMAGNPRSLDEMARVSRVEKMELTRTYRYIVRELSLEVQPADPEHYLPRF
ISDLDLSEETQRQARDLVEGARQSGMLSGKSPVGIAAAAVYAAALLTNEKVTQSQVSDVA
DISEVTIRNRYKELLEAEDLPA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcaacaacgcggacaagcacacgagaacgagacgagaaaatcaccgaatcg
acggaacaggaggctgtagagacctgtcccgaatgtagtggcaacgtcgttacggatacc
gagcacggcgaaacagtctgtgaagactgtgggctggtcgttgaggaagacgagatcgac
cgcgggccggaatggcgtgcgttcaattccgccgagaaggaccgcaagtcccgcgtcggc
gcgccgacgacgaacatgatgcacgacaagggtctctcgacgaacatcggctggcagaac
aaggacgcctacgggcgctccctctccagcgaacagcgccagaagatgcagcggctccgg
acctggaacgaacggttccggacccgtgactccaaggagcgcaatctcaagcaggcactg
ggcgaaatcgaccgtatggcctctgcgctggggctcccccagaacgtccgtgagacatcc
agcgtcatctaccgccgcgcactcggtgacgacctccttccgggtcgctctatcgagggc
gttgcgaccgctgcgctgtacgcggccgctcgcatggccgggaacccccggtcgctggac
gagatggcccgtgtctcccgcgtcgaaaagatggagctcacacggacctaccgctacatt
gtccgggaactcagtctcgaagttcagccggcggacccggaacactacctcccacggttc
atctccgacctggacctcagtgaggagacccagcgacaggcacgggacctcgtcgaaggt
gctcgtcagtcggggatgctctccggcaaatcgccggtcggcatcgccgctgcggccgtc
tacgccgccgcgttgctgaccaacgagaaggtcacacagagccaggtcagcgacgtcgct
gacatctctgaagtgaccatccgaaaccgatacaaggaactcctcgaagccgaggacctt
ccggcctga
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