KEGG   Haloarcula marismortui ATCC 43049: rrnAC1139
Entry
rrnAC1139         CDS       T00211                                 
Symbol
yprA4
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hma  Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:hma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hma03400]
    rrnAC1139 (yprA4)
Enzymes [BR:hma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     rrnAC1139 (yprA4)
    5.6.2.6  RNA 3'-5' helicase
     rrnAC1139 (yprA4)
DNA repair and recombination proteins [BR:hma03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    rrnAC1139 (yprA4)
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WHD_Lhr ResIII HypA Zn_ribbon_8
Other DBs
NCBI-ProteinID: AAV46092
UniProt: Q5V310
LinkDB
Position
I:1015136..1017970
AA seq 944 aa
MTDGVARGDDAFTALGPAVRSALSERGFTTPTDPQRKAIPTLADGRDALVVAPTGTGKTE
TGMLPVFDALAESEDRFGIGALYITPLRALNRDMRQRLDWWGETLGLEVDVRHGDTTDYQ
RQKQANDPPDVLVTTPETLQAMLTGSKLRTALEDIEHIVIDEVHELAAAKRGAQLTIGLE
RLRELSGRFQRIGLSATVGDPHEVGRFLTGGRTCAIVEVDIGSRLDIEVVRPQITDRDEE
LSSSLVTDAGTASHVRFIADLIDENESVLLFVNTRQTAEALGSRFKELGTDLGVHHGSLS
KEARIDVEDRFKAGDLDALLCTSSMELGIDVGHVDHVVQYGSPRQVSRLVQRVGRAGHRR
DLVSSGTVVTTDTDDTLEALAIARQAEAGDVEPAEIHDGSLDTVANQIAGLVMDAGEIRA
MRAYEILTRAYPFRDLDEAQFKQVVEELAANNVIWLDEDRDTLEKRRGTWQYFYQNLSMI
PDEATYDVEDVASGQQVGTLDEKFVVNFATPGEVFVQRGEMWRITNIDEEEEVVTVSPIE
DPAGEVPSWVGQEIPVPRAVAAEVGELRRVAGRQLQDGADTEAVARDVATRYAAGPETVV
DGLSQVEEHEGPIPDDTTILVEFHGREVIVNACYGHKINETLGRVLSALLGQRAGSSVAM
DVDPYRITLEVPRRITAGDVIEVIEDTDPDHLPALIELSLKNADALKFKLAQVATKFGSL
KRWRGRGSTDFGRDRLLAALEDTPMYDEALREVRHEDLAIEATADLLRDIQNGDVALETV
GEHTPIGTGGSSSGRELLSPENADASVIKTVKERIQSDRVILACLHCKKWDRKQQVKRVR
DQPSCPQCGSTRIAALNPWAEEVVSAVRTDDKDEEQEKMTERAYRSASLVQSHGKQAVVA
LAARGVGPHNAARIINRLREDEDEFYRDILRQEREYARTQSFWG
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgactgacggggtcgctcgcggcgatgacgccttcactgcgctcgggccggccgtccgc
agtgcgctctccgagcgcggcttcacgacgccgaccgacccacagcgaaaggcgattcca
actctggctgacgggcgagacgcgctagtcgtcgccccgaccggaaccggaaaaactgaa
acggggatgttgccggtcttcgacgcgctggccgaatccgaggaccgctttggcatcggc
gcgctgtacatcacgccgctccgggcgctgaaccgcgacatgcgccagcgcctcgactgg
tggggcgaaacgctcggcctcgaagtggacgttcgccacggcgacacgactgactaccag
cgccagaagcaggcaaacgacccgccggacgtgctggtgactacgccggaaacgctacag
gcgatgctcaccgggtcgaagctccggacagcgctagaggatatcgagcatatcgttatc
gacgaggtccacgaactcgccgcggccaagcgcggcgcacagttgactatcggactcgaa
cggctccgggaactgtccgggcggttccagcgaatcggcctctcggcgaccgtcggcgac
ccacacgaagtcggccggtttctcactggcggccgaacctgcgccatcgtggaagtggac
atcggcagccggctagatatcgaagtggttcggccccagattactgaccgggacgaggaa
ctgtcgagctccctcgtcactgacgcgggaacggctagccacgtccggttcatcgcggac
ctcatcgacgaaaacgaatctgtcctgctgtttgtcaacacccgacagacagcggaggca
ctgggctcgcggttcaaagagctgggaaccgacctcggcgtccaccacggctcgctgtcg
aaagaggcccggatcgacgtggaggaccgcttcaaagccggcgacctcgatgccctgttg
tgtacctcctcgatggaactgggtatcgacgtgggccacgtcgaccacgtcgtccagtac
ggcagcccccggcaggtgtcccgcctcgtccagcgggtcggccgcgccggccaccgccgg
gacctcgtttcctcgggcacggtcgttacgactgacaccgacgacacgctggaggcgctg
gcgattgcgagacaggccgaagccggcgatgtcgagcccgccgaaatccacgacgggagc
ctcgacacagttgccaaccagatcgccggactggtgatggatgccggcgaaattcgggcg
atgcgggcctacgagatactgacccgcgcgtacccgttccgggacctcgacgaggcccag
ttcaagcaggtcgtcgaggaactcgcggcgaacaacgtcatctggctggacgaggaccga
gacacgttagagaagcgccgggggacctggcagtatttctatcagaacctctcgatgatc
cccgacgaggctacctacgacgtggaggacgtggcctcaggccagcaggtcgggaccctc
gatgagaagttcgtcgtcaacttcgccacgcccggcgaggtgttcgtccagcgcggggag
atgtggcgcatcacgaatatcgacgaggaagaggaagtcgtgaccgtctcacccatcgaa
gaccccgccggtgaggtcccgtcgtgggtggggcaggagattccggttccgagagccgtc
gccgcggaagtcggcgaactccgtcgtgtggctggtcggcaactccaggacggcgcggac
accgaggccgtcgccagagacgtggcgactcgctatgccgccggccccgaaaccgtcgtc
gacgggctctcgcaggtggaagaacacgaagggccgattccggacgacacgactattctg
gtggagttccacggccgggaggtcatcgtcaacgcttgctacgggcacaaaatcaacgaa
acgctgggccgggtcctctcggcgctgctcggtcaacgggcagggtcgtcggtcgcgatg
gacgtcgacccgtaccggattacgctggaggtcccgcgccggatcaccgccggcgatgtc
atcgaagtcattgaggacaccgatcctgaccacctcccagcgctcatcgaactcagcctg
aaaaacgccgacgcgctgaagttcaagctcgcgcaggtggcgacgaagttcggctcgctc
aagcgctggcggggccgggggtcgactgacttcggccgtgaccgcctgctggcagcgctt
gaggacacgccgatgtacgacgaagccctgcgcgaggttcgccacgaggacctcgctatc
gaagcgacagccgaccttctccgagatatccagaacggcgacgtggcgctcgaaacagtg
ggcgaacacacgccaatcgggactggcggtagttcctccgggcgggaactcctctcaccg
gagaacgccgacgcgagcgtcatcaaaaccgtcaaggagcgcatccagagtgaccgcgtc
atcctcgcgtgtctgcactgcaagaagtgggaccgcaaacagcaagtcaagcgcgtgcgg
gatcagccgtcgtgtccgcagtgtggctcgacccgaatcgccgcgctgaatccgtgggcc
gaggaagtcgtctcggccgtccggaccgacgacaaggacgaggagcaggagaagatgacc
gaacgagcctaccgctcggcctcgctggtccagagccacgggaaacaagccgtggtcgcg
ctggccgcccgcggtgtcgggccgcacaacgccgcccgcattatcaaccgcctgcgagag
gacgaagacgagttctaccgggacatcctccgacaagagcgggagtacgcacggacgcag
tcgttctggggttga

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