Haloarcula marismortui ATCC 43049: rrnAC1357
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Entry
rrnAC1357 CDS
T00211
Symbol
tfbB
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
rrnAC1357 (tfbB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
rrnAC1357 (tfbB)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
rrnAC1357 (tfbB)
Prokaryotic type
Archaeal type
TFB
rrnAC1357 (tfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Cyclin_C
HTH_Tnp_ISL3
Anti-TRAP
DZR_2
Sigma70_r4
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AAV46288
UniProt:
Q5V2G4
LinkDB
All DBs
Position
I:1209303..1210277
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AA seq
324 aa
AA seq
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MTDTSIRRYSNERETETEQTEEEESESLVCPECSGALLSDSERGETVCEDCGLVVEEDEI
DPGPEWRAFDSKEKDEKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKMQRL
RTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDEDLLPGRSIE
GVSTASLYAAARQAGTPRSLDEIAGVSRVEKDEIARTYRYVVRELSLEIQPADPESYVPR
FASDLDLSEEVERRARQLLQNAKQEGVHSGKSPVGLAAAAVYAASLLTNEKVTQSQVSEV
ANISEVTIRNRYHELLEAEDNIHP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccagcatccgccgatactcgaacgagcgcgagacggagacagagcagacg
gaggaagaggagtcggagtcactcgtctgtccggagtgtagcggtgcgttactctccgac
agcgagcgcggtgaaacggtgtgtgaagactgtgggctagtcgtcgaagaagacgagatc
gaccccggtcccgagtggcgcgcgttcgattcgaaagagaaagacgagaagtcccgcgtt
ggcgcgccgacgacgaacatgatgcacgacaagggcctctcgacgaacatcggctggcaa
gacaaggacgcctacggcaactccctgtcctcgcgccagcgcgagaagatgcagcgtctg
cggacctggaacgagcggttccgcacccgcgactccaaagaacgcaacctcaaacaggcc
ctcggtgagattgaccggatggcttcggcgctcggactgccagagaacgtccgcgagaca
gctagcgtcatctatcgtcgcgcactggacgaggacctgctgcccggccgttccatcgaa
ggcgtctcgacggcgtcactgtacgccgccgcgcgccaggccggcacgccgcggtcgctc
gacgagattgcaggcgtgtcccgcgtcgagaaagacgagatcgcgcggacctaccgctac
gtcgtccgggaactcagcctcgaaatccagccggccgaccccgagagctacgtcccgcgg
ttcgcgtcagacctcgacctctccgaggaggtcgaacggcgcgcccgccagctcctccag
aacgccaagcaagagggcgtccactccgggaagtccccggtcggcctcgccgctgcggcg
gtgtacgccgcttcactgctcaccaatgagaaggtgacccagagtcaggtcagcgaagtc
gccaacatctccgaggttaccatccgcaaccgctaccacgaactgctggaagcagaggac
aacatccacccctaa
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integrated database retrieval system
