Haloarcula marismortui ATCC 43049: rrnAC1477
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Entry
rrnAC1477 CDS
T00211
Symbol
fdfT
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma00100
Steroid biosynthesis
hma00909
Sesquiterpenoid and triterpenoid biosynthesis
hma01100
Metabolic pathways
hma01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
rrnAC1477 (fdfT)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
rrnAC1477 (fdfT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hma01006
]
rrnAC1477 (fdfT)
Enzymes [BR:
hma01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
rrnAC1477 (fdfT)
Prenyltransferases [BR:
hma01006
]
Terpene biosynthesis
Squalene/phytoene synthase
rrnAC1477 (fdfT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AAV46402
UniProt:
Q5V250
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Position
I:complement(1315132..1316382)
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AA seq
416 aa
AA seq
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MIAARTVSTNIAVSRVFTVASSQSLCRSYLKIGSDTRESVGTPNRDRDGTDAVAVPFLSS
YALPRMSGMSQNHTDRSSSEDIEWCYDAVHRVSRTFSLTISELNEPMARDICLGYLLCRV
ADTIEDAGHLPPAVQTELLQTYSRSLEPSSGTTVSSFHDAVEEWIPTTTNADWEVVENAG
RIVDVFHTLDDHSTQTIRGPVRELVDGMAMFVDRYADAGGLRIKTLDELEEYCWYAAGTV
GTLVTGLVSHEATDEQIAQMEENARSFALLLQLVNVAKDAATDMEEENNVYLPLELLHEQ
GLDHSDVSDTGNVDSLVPVIEQVTERAEGYLDDAQAWLEAMPETRGNTLSAWAIPFLLAV
GTIRELRERPADVIEQGNVKISREEVHSVTQQFGGDNDPSIGELRAKIRQQPLHQY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcgagaaccgtcagcactaatatcgctgtgtctcgggtattcacagttgcg
tcctcccaatcgctgtgccgttcatacctcaagataggctcggacactcgtgagtctgtc
ggaacaccgaaccgtgaccgggatggaactgacgccgtagccgtcccatttttatcatcg
tatgccctaccccggatgtcgggaatgtctcagaaccacacagaccggtcgtcttcggaa
gacatcgagtggtgctacgatgctgtccatcgtgtgtcgcggacgtttagtctcacaatt
tcggaactcaacgaaccgatggcccgggacatctgtctgggctatcttctttgtcgtgtg
gctgacacgattgaggacgccggccatctccctccagcggtacagaccgaactcttgcag
acgtatagtcgctcgctcgaaccatcgagcgggacgaccgtgtcatcgttccacgacgcc
gtcgaggagtggattcccacgacgacgaacgctgactgggaagtcgtcgagaacgcgggc
cgtatcgtcgacgtgtttcacacgcttgacgaccactccacgcagaccatccgcgggccg
gtccgggagctcgttgatgggatggcgatgttcgtcgaccgctacgccgacgccggtggg
cttcgaatcaaaacgctcgacgaactcgaagagtactgctggtacgccgcaggcactgtg
ggcacgctggtgaccgggctggtttcacatgaagccaccgacgagcagatcgcccagatg
gaggaaaacgcccgctcctttgccctgctgctccagctcgtcaacgtcgccaaggacgcc
gcaacggacatggaagaggagaacaacgtctacctcccgctggaactactccacgaacag
gggcttgatcacagcgacgtgagcgacaccggcaacgtcgattcgctggtgcccgtcatc
gagcaggtcaccgagcgagcagagggctatctcgacgacgcacaggcgtggctcgaagcc
atgcccgaaacccgcggtaacaccctctcagcgtgggccattccgttcctgctcgcggtc
gggacgatccgtgaactccgcgaacgacccgccgacgtcatcgagcagggcaacgtcaaa
atttctcgcgaggaggtccactccgtgacacagcagttcggcggcgacaacgacccctct
atcggggaactgcgggccaaaatccgccaacagccgctccaccagtactga
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