Haloarcula marismortui ATCC 43049: rrnAC2051
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Entry
rrnAC2051 CDS
T00211
Symbol
tfbF
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
rrnAC2051 (tfbF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
rrnAC2051 (tfbF)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
rrnAC2051 (tfbF)
Prokaryotic type
Archaeal type
TFB
rrnAC2051 (tfbF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_tTFIIB
Trm112p
Cas12f1-like_TNB
Auto_anti-p27
DZR
DUF8054_C
DUF1272
DZR_2
Sigma70_r4
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AAV46908
UniProt:
Q5V0P5
LinkDB
All DBs
Position
I:complement(1840688..1841707)
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AA seq
339 aa
AA seq
DB search
MTTRSIYSPDERDESADEQAESEASTGHACPDCGGSLVTDDSRGETVCESCGLVVDEDEI
DHGPEWRAFDSQERDNKRRVGAPTTEMKHDKGLSTNIGWQDKDAYGNSLSTRQREKMQRL
RTWDERFRTRDHAERNLKQALGEIDRMGSALGVPESARETASVIYRRALDEGMLPGRSIE
GMATAALYAAVRQANLPQTLDDMAVVSRVDEMEFTRAYRYLNRELSLQVGPPDPATYLSK
FVSKLDADDALERQARALIEAGKEANVHSGKSPVGLAAAAIYAAGLLLGEEMTQETVSEA
TDISTVTIRERYRELLEAESELDDSAVDAASGTESGASA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacgcagcatctattcccccgacgaacgcgatgaaagtgcggacgaacaggcc
gagtccgaggcgagcactggccacgcctgcccggactgtggcggaagcctcgtcaccgac
gacagtcgtggcgagaccgtctgcgagtcgtgtggtctcgtcgtcgatgaggacgagatc
gaccacgggccggagtggcgcgctttcgacagtcaggagcgcgacaacaagcgccgggtc
ggcgcgccgacgaccgagatgaaacacgacaagggcctctcgacgaatatcggctggcag
gacaaggacgcctacggcaactccctgtcgacgcgccagcgcgagaagatgcagcgcctg
cggacctgggacgagcggttccgcacccgcgaccacgccgagcgcaacctcaagcaggcg
cttggcgagattgaccggatggggagcgccctcggtgtccccgagagcgcccgtgagacg
gccagcgtcatctaccgccgcgcgctcgatgaagggatgctacccggtcgctccatcgaa
gggatggcgaccgccgcgctgtacgctgccgtcaggcaggcgaaccttccgcagacgctt
gacgacatggctgtcgtcagccgcgtcgacgagatggagttcactcgggcctatcgctat
ctcaaccgcgaactctccctgcaggtcggcccgccggaccctgcaacctacctcagcaag
ttcgtctccaaactcgacgcagacgacgccctcgaacgccaggcccgcgccctcatcgaa
gcggggaaggaagcgaacgtccacagcggcaagagccccgtcggcctcgccgctgcggcc
atctacgccgccggcctcctactcggcgaggagatgacccaggagaccgtcagtgaggct
actgacatcagcaccgtgaccatccgcgagcgctaccgcgaactgcttgaagccgagtcg
gaactcgacgacagcgccgtcgacgcggccagcggcaccgaatccggcgcgagcgcctga
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integrated database retrieval system
