KEGG   Haloarcula marismortui ATCC 43049: rrnAC2103
Entry
rrnAC2103         CDS       T00211                                 
Symbol
rli
Name
(GenBank) RNase L inhibitor
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
hma  Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:hma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hma03009]
    rrnAC2103 (rli)
Ribosome biogenesis [BR:hma03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    rrnAC2103 (rli)
SSDB
Motif
Pfam: ABC_tran SMC_N Fer4_RLI AAA_21 AAA_22 AAA Rad17 AAA_16 RNA_helicase nSTAND3 Fer4_6 AAA_23 AAA_24 RsgA_GTPase RuvB_N NB-ARC AAA_33 Fer4 Fer4_7 Fer4_9 Fer4_10
Other DBs
NCBI-ProteinID: AAV46954
UniProt: Q5V0J9
LinkDB
Position
I:1882787..1884616
AA seq 609 aa
MAEDSIAVVDLERCQPDRCNYECMNYCPPNRSGKECIVKREDEYEEDEPFEGQPDQVRIS
EEICLGESCGICVNKCPFDAIEIINLPQELTDEPVHRYGENAFALYGLPSPAEGQVTGIL
GPNGIGKTTAVRILADEMQPNLGRYGEEPSWDEILDEYRGTALQEYLEQMRGGDVDVARK
PQYVDRIPNQFDGKAIELLDQTDERGALDYLVEQTGIEPVVDNHIDDLSGGELQRVALVA
TLARDADFYFLDEITPYLDIGQRMTAARLIRELAEEEDRSMLVVEHDLAILDLLADNINV
AYGTPGAFGVITPPKSTKKGINEYLSGYLENENMRIRQTDIEFEEHAPRSASQGDVVIEY
PELQKSYGDGEFSLDVEAGTIRESEVLGVVGPNGIGKSTFAKMLAGRLEPTAGEIDTSLD
IAYKPQYIEIDQPMRVDAFLASITDDFGSSYWNTEIAQPLQLESVMEQQLTDLSGGERQR
VAIAACLSKDADLYLLDEPSAHLDVEQRVMATSAIRRYAENHDATAMVIDHDIYMIDLLA
DRLLVFDGEPAKNGHAAPPQGMREGMNEFLQNLDITFRRDERTSRPRINKPDSQLDREQK
NAGEYYYAP
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggccgaagacagtatcgccgtcgtcgacttggagcggtgtcagcccgaccgctgtaac
tacgagtgcatgaactactgcccgcccaaccgcagcgggaaagaatgcatcgtcaaacgg
gaagacgagtacgaggaagacgagcccttcgagggccagcccgatcaggtccgcatctcc
gaagagatctgtctgggcgagtcctgtggtatctgcgtgaacaagtgtccgttcgacgcg
atcgaaatcatcaatctcccacaggaactgaccgacgaaccggtccaccgctacggggag
aacgccttcgcactgtacgggctcccgagccccgccgaagggcaggtgacggggattctc
ggcccgaacggcatcgggaagaccaccgccgtccgcatcctcgcagacgagatgcagccc
aatctgggccgctacggcgaggaaccgagctgggacgaaatcctcgatgagtaccgcggc
accgccctgcaggagtaccttgaacagatgcgcggcggtgacgtggatgtcgcccgcaag
ccccagtacgtcgaccggatcccgaaccagttcgacggcaaggccatcgaactgctggac
cagaccgacgaacgcggtgccctcgactacctcgtcgagcagacgggtatcgagccggtc
gtcgacaaccacatcgacgacctctccggcggggaactccagcgggtcgcgctcgtcgcc
acgctggcacgggacgcggacttctacttcctcgacgagatcacgccgtatctggacatc
ggccagcggatgaccgccgcacggctcatccgcgaactcgccgaggaggaggaccgctcg
atgctcgtcgtcgagcacgacctcgccattctggacctgctcgcggacaacatcaacgtc
gcctacgggacccccggcgcgttcggtgtcatcacaccgccaaaatcgacgaagaagggc
atcaacgagtacctctcgggctacctcgagaacgagaatatgcgcatccgccagacggac
atcgagttcgaggagcacgcgccacggagtgcgtcccagggcgacgtggtcatcgagtac
cccgaactccagaagagctacggcgacggcgagttctcactggatgtcgaggccggcacc
atccgcgagagcgaagtgctgggcgtcgtcgggccgaacggtatcgggaagtcgacgttc
gcgaagatgctcgccggccggctcgaaccgaccgcgggcgagatcgacaccagcctcgac
atcgcctacaagccccagtatatcgaaatcgaccagccgatgcgggtcgacgccttcctc
gcgtcgattacggacgacttcggcagttcctactggaacaccgaaatcgcccagccgctc
cagttggagtcggtgatggaacagcaactcaccgacctctctggcggggagcgccagcgg
gtcgccatcgcggcctgcctctcgaaagatgccgacctctacctgctcgacgagccctcg
gcccatctggacgtggaacagcgcgtcatggcgacctccgccatccgccgctacgccgag
aaccacgacgcgacggcgatggtcatcgaccacgacatctacatgatcgacctgctggcc
gaccgcctgctcgtcttcgacggcgagccggccaagaacggccacgctgcgccgccacag
ggcatgcgcgagggcatgaacgagttcctccagaacctcgatatcacgttccgccgcgac
gagcgaacctcacggccccgtatcaacaagcctgactcgcaactggaccgcgagcagaaa
aacgccggcgagtactactacgcgccgtag

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