Haloarcula marismortui ATCC 43049: rrnAC2103
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Entry
rrnAC2103 CDS
T00211
Symbol
rli
Name
(GenBank) RNase L inhibitor
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
hma
Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hma03009
]
rrnAC2103 (rli)
Ribosome biogenesis [BR:
hma03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
rrnAC2103 (rli)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_22
AAA
Rad17
AAA_16
RNA_helicase
nSTAND3
Fer4_6
AAA_23
AAA_24
RsgA_GTPase
RuvB_N
NB-ARC
AAA_33
Fer4
Fer4_7
Fer4_9
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
AAV46954
UniProt:
Q5V0J9
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All DBs
Position
I:1882787..1884616
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AA seq
609 aa
AA seq
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MAEDSIAVVDLERCQPDRCNYECMNYCPPNRSGKECIVKREDEYEEDEPFEGQPDQVRIS
EEICLGESCGICVNKCPFDAIEIINLPQELTDEPVHRYGENAFALYGLPSPAEGQVTGIL
GPNGIGKTTAVRILADEMQPNLGRYGEEPSWDEILDEYRGTALQEYLEQMRGGDVDVARK
PQYVDRIPNQFDGKAIELLDQTDERGALDYLVEQTGIEPVVDNHIDDLSGGELQRVALVA
TLARDADFYFLDEITPYLDIGQRMTAARLIRELAEEEDRSMLVVEHDLAILDLLADNINV
AYGTPGAFGVITPPKSTKKGINEYLSGYLENENMRIRQTDIEFEEHAPRSASQGDVVIEY
PELQKSYGDGEFSLDVEAGTIRESEVLGVVGPNGIGKSTFAKMLAGRLEPTAGEIDTSLD
IAYKPQYIEIDQPMRVDAFLASITDDFGSSYWNTEIAQPLQLESVMEQQLTDLSGGERQR
VAIAACLSKDADLYLLDEPSAHLDVEQRVMATSAIRRYAENHDATAMVIDHDIYMIDLLA
DRLLVFDGEPAKNGHAAPPQGMREGMNEFLQNLDITFRRDERTSRPRINKPDSQLDREQK
NAGEYYYAP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagacagtatcgccgtcgtcgacttggagcggtgtcagcccgaccgctgtaac
tacgagtgcatgaactactgcccgcccaaccgcagcgggaaagaatgcatcgtcaaacgg
gaagacgagtacgaggaagacgagcccttcgagggccagcccgatcaggtccgcatctcc
gaagagatctgtctgggcgagtcctgtggtatctgcgtgaacaagtgtccgttcgacgcg
atcgaaatcatcaatctcccacaggaactgaccgacgaaccggtccaccgctacggggag
aacgccttcgcactgtacgggctcccgagccccgccgaagggcaggtgacggggattctc
ggcccgaacggcatcgggaagaccaccgccgtccgcatcctcgcagacgagatgcagccc
aatctgggccgctacggcgaggaaccgagctgggacgaaatcctcgatgagtaccgcggc
accgccctgcaggagtaccttgaacagatgcgcggcggtgacgtggatgtcgcccgcaag
ccccagtacgtcgaccggatcccgaaccagttcgacggcaaggccatcgaactgctggac
cagaccgacgaacgcggtgccctcgactacctcgtcgagcagacgggtatcgagccggtc
gtcgacaaccacatcgacgacctctccggcggggaactccagcgggtcgcgctcgtcgcc
acgctggcacgggacgcggacttctacttcctcgacgagatcacgccgtatctggacatc
ggccagcggatgaccgccgcacggctcatccgcgaactcgccgaggaggaggaccgctcg
atgctcgtcgtcgagcacgacctcgccattctggacctgctcgcggacaacatcaacgtc
gcctacgggacccccggcgcgttcggtgtcatcacaccgccaaaatcgacgaagaagggc
atcaacgagtacctctcgggctacctcgagaacgagaatatgcgcatccgccagacggac
atcgagttcgaggagcacgcgccacggagtgcgtcccagggcgacgtggtcatcgagtac
cccgaactccagaagagctacggcgacggcgagttctcactggatgtcgaggccggcacc
atccgcgagagcgaagtgctgggcgtcgtcgggccgaacggtatcgggaagtcgacgttc
gcgaagatgctcgccggccggctcgaaccgaccgcgggcgagatcgacaccagcctcgac
atcgcctacaagccccagtatatcgaaatcgaccagccgatgcgggtcgacgccttcctc
gcgtcgattacggacgacttcggcagttcctactggaacaccgaaatcgcccagccgctc
cagttggagtcggtgatggaacagcaactcaccgacctctctggcggggagcgccagcgg
gtcgccatcgcggcctgcctctcgaaagatgccgacctctacctgctcgacgagccctcg
gcccatctggacgtggaacagcgcgtcatggcgacctccgccatccgccgctacgccgag
aaccacgacgcgacggcgatggtcatcgaccacgacatctacatgatcgacctgctggcc
gaccgcctgctcgtcttcgacggcgagccggccaagaacggccacgctgcgccgccacag
ggcatgcgcgagggcatgaacgagttcctccagaacctcgatatcacgttccgccgcgac
gagcgaacctcacggccccgtatcaacaagcctgactcgcaactggaccgcgagcagaaa
aacgccggcgagtactactacgcgccgtag
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