Haloarcula marismortui ATCC 43049: rrnAC2302
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Entry
rrnAC2302 CDS
T00211
Symbol
rpa
Name
(GenBank) replication A related protein
KO
K07466
replication factor A1
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03030
DNA replication
hma03420
Nucleotide excision repair
hma03430
Mismatch repair
hma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
rrnAC2302 (rpa)
03420 Nucleotide excision repair
rrnAC2302 (rpa)
03430 Mismatch repair
rrnAC2302 (rpa)
03440 Homologous recombination
rrnAC2302 (rpa)
03460 Fanconi anemia pathway
rrnAC2302 (rpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hma03000
]
rrnAC2302 (rpa)
03032 DNA replication proteins [BR:
hma03032
]
rrnAC2302 (rpa)
03400 DNA repair and recombination proteins [BR:
hma03400
]
rrnAC2302 (rpa)
Transcription factors [BR:
hma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
rrnAC2302 (rpa)
DNA replication proteins [BR:
hma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
rrnAC2302 (rpa)
DNA repair and recombination proteins [BR:
hma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
rrnAC2302 (rpa)
MMR (mismatch excision repair)
rrnAC2302 (rpa)
DSBR (double strand breaks repair)
HR (homologous recombination)
rrnAC2302 (rpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_Ssb-like
SHLD2_OB1
Peptidase_inhib_put
Motif
Other DBs
NCBI-ProteinID:
AAV47126
UniProt:
Q5V027
LinkDB
All DBs
Position
I:complement(2049520..2050986)
Genome browser
AA seq
488 aa
AA seq
DB search
MGAIEDIYEDLETDVPEEEFREAVEEKVEQMGGLADEETAAMLLAHELNENEVNAIADIE
PGMDEVKFLAKVMAIGDLKTFERDDEDEDGRVINVEAADESGSLRLAFWDGQAVDIDEGK
LEVGDVLRVKGRPKDGYNGLEVSVDKAEPDEDATIDVEPGAGSSIDALTMGQSDVTLRGL
VLDTDSIRTFDRDDGSEGRVSNLTLGDETGRIRVTLWDDRADRADELDAGAAVEIIDGYV
RERDGSLELHVGDQGAVDEVEDDVAFEPDADPIAEVELEETADIAGVVRSADPKRTFDRD
DGSEGQVRNVRIQDATGDIRVALWGDKADKDIAPGDEVLAADVEIQDGWQDDKEASASWN
STIVVLDDGADLATGGAGGGASAETTDAEHAGLSSFGDEGDDTDADSSGNEAAAVSAGTG
DTSPDGGAQSAGQQVEFTGTVVQTGDPVVLDDGEQTMSVETGERVQLGQEITVRGELRDD
RLHAEDVF
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgatagaggacatttacgaggacctagagacggacgtccccgaggaggagttc
cgcgaggccgtcgaggagaaggtcgagcagatgggagggctcgccgacgaggagacggcc
gcgatgctgttggcccacgaactcaacgagaatgaggtcaacgccatcgccgatatcgaa
cctgggatggacgaggtgaagttcctcgccaaggtgatggccatcggcgacctgaagacc
tttgaacgcgacgacgaggacgaggacggccgggtcatcaacgtcgaggccgccgacgag
agcggcagcctcaggctcgccttctgggacggtcaggccgtcgacatcgacgaggggaaa
ctggaggtcggcgacgtgctccgggtcaagggtcggccgaaggacggctacaacgggctg
gaggtgtccgtcgacaaggcagagccggacgaggacgccacaatcgacgtggagccgggc
gctggctcgtccatcgacgcgctgacgatgggacagtccgatgtgacgctgcgcgggctc
gtgcttgataccgattcgattcggacgttcgaccgcgacgacggtagcgagggccgcgtc
tcgaacctcacacttggcgacgagacggggcgcatccgggtgacgctgtgggacgaccga
gccgaccgcgccgacgaactcgatgcgggcgcggccgtcgaaataattgacggctacgtt
cgggagcgggacggctcgcttgaactccacgttggcgaccagggggccgtcgacgaagtg
gaagacgacgtggcctttgagcccgacgccgacccaatcgcagaggtcgaactcgaagag
acggccgatattgctggcgtcgtgcgctcggccgaccccaagcggacgttcgaccgcgac
gacggcagcgaggggcaagtccggaacgtccgcattcaggacgccaccggcgacatccgc
gtggcgctgtggggcgacaaggcggacaaggacattgcaccgggggacgaggtgctcgcg
gccgatgtcgaaattcaggacggctggcaggacgacaaggaggcctcggcgagctggaac
tccacgattgtcgtgcttgatgacggtgcggatctggcgactggtggcgcaggcggggga
gccagcgccgagacgaccgacgccgaacacgctggcctgtcctccttcggcgacgaaggg
gacgacactgacgctgatagcagcggcaacgaggcggccgctgtcagcgccggcaccggc
gacacgtcaccggacggtggcgcacagagtgccggccagcaggttgagttcaccggcacc
gtcgtccagactggcgaccccgtcgtactcgacgacggtgagcagacgatgagcgtcgaa
accggcgagcgcgtgcagttagggcaggaaataactgtccgtggggaactccgtgacgac
cggcttcacgctgaggacgtgttctga
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integrated database retrieval system
