Haloarcula marismortui ATCC 43049: rrnAC2565
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Entry
rrnAC2565 CDS
T00211
Symbol
rfcC1
Name
(GenBank) replication factor C small subunit
KO
K04801
replication factor C small subunit
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
rrnAC2565 (rfcC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hma03032
]
rrnAC2565 (rfcC1)
DNA replication proteins [BR:
hma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
rrnAC2565 (rfcC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RuvB_N
AAA_14
Rad17
AAA_22
AAA_assoc_2
AAA_16
RCF1-5-like_lid
AAA_3
ResIII
Mg_chelatase
AAA_18
AAA_7
AAA_5
Sigma54_activat
DNAX_ATPase_lid
nSTAND3
AAA_2
TIP49
Sigma54_activ_2
AAA_30
AAA_24
NPHP3_N
NACHT
AAA_25
PhoH
NB-ARC
Viral_helicase1
PEPCK_ATP
AAA_19
AAA_28
RNA_helicase
IstB_IS21
TrwB_AAD_bind
TsaE
DUF815
AAA_11
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AAV47358
UniProt:
Q5UZE5
LinkDB
All DBs
Position
I:complement(2286930..2287967)
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AA seq
345 aa
AA seq
DB search
MHLRLSTLAGFKTGPRFQSSMSEAESESRAGREEVWIEKYRPQTLDDVMGHENIVGRLKS
YVSRNDLSHMLFSGPAGTGKTTCATAIARELYGDDWREHFLELNASDERGIDVVRDRIKN
FARTSFGGVEYRIIFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSR
CAVFRFSPLADDAVAEEIRTIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAASVSGD
TVDESAVYAITSTARPEEIRTMVQSALDGDFTASRATLDRLLTEEGIAGGDIIDQLHRSI
WEFDIDDDAAVRVLERIGETDYRITRGANERVQLEAMLASLAQGE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgagactgtcgactctcgcggggtttaagaccggcccacgcttccaatcgtcc
atgagtgaggccgagtccgagtcgcgggcgggacgcgaggaggtctggatcgagaagtac
cgcccgcagacgctcgacgacgtgatggggcacgagaatatcgtcgggcggctcaagagc
tacgtctcgcgcaacgacctgagccacatgctgttttccgggccggcagggacggggaag
acgacgtgcgcgacggctatcgcccgtgaactgtacggcgacgactggcgcgagcacttc
ctcgaactgaacgcctccgacgagcgtggtatcgacgtggtccgggaccgtatcaagaac
ttcgcccggacgagcttcgggggcgtcgagtaccgtatcatcttcctcgacgaggccgac
gcgctgaccagcgacgcccagtcggcgctgcgccggacgatggagcagttctcgaataac
gtccgctttattctctcgtgtaactactccagccagatcatcgacccgatccaatcgcgc
tgtgcggtcttccggttctcgccgcttgcagacgacgccgttgccgaggaaatccgaacc
atcgctgccgaagaagacattgaactgaccgaagacggactcgacgcactcgtctacgcc
gccgacggggatatgcggaaagccatcaacggcctgcaagctgcatcggtcagcggcgac
acggtcgacgagtcggcagtgtacgctatcacttcgacggcccgcccggaagagatccgg
acgatggtccagtcggcgctggacggcgacttcaccgcgtcccgggcgaccctcgataga
ctgctgaccgaggaaggcatcgctggcggtgacatcatcgaccaactgcatcgctccatc
tgggagttcgatattgacgacgacgcagccgtccgagtgctcgaacgcatcggcgaaacc
gattatcggattacccgtggtgcgaacgagcgtgtgcaactcgaagcgatgctggcctcg
cttgcacagggcgagtaa
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integrated database retrieval system
