Haloarcula marismortui ATCC 43049: rrnAC2719
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Entry
rrnAC2719 CDS
T00211
Symbol
rad3b
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03022
Basal transcription factors
hma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
rrnAC2719 (rad3b)
09124 Replication and repair
03420 Nucleotide excision repair
rrnAC2719 (rad3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hma03021
]
rrnAC2719 (rad3b)
03036 Chromosome and associated proteins [BR:
hma03036
]
rrnAC2719 (rad3b)
03400 DNA repair and recombination proteins [BR:
hma03400
]
rrnAC2719 (rad3b)
Enzymes [BR:
hma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
rrnAC2719 (rad3b)
Transcription machinery [BR:
hma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
rrnAC2719 (rad3b)
Chromosome and associated proteins [BR:
hma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
rrnAC2719 (rad3b)
DNA repair and recombination proteins [BR:
hma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
rrnAC2719 (rad3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
DUF4456
CT398_CC
ATPase
HBB
AAA_34
Asparaginase_C
NBAS_11th
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAV47486
UniProt:
Q5UZ17
LinkDB
All DBs
Position
I:complement(2422067..2424220)
Genome browser
AA seq
717 aa
AA seq
DB search
MRFFPFEEPYDHQQEAMGTIYDALEEGRDVLFEGACGTGKTLASLVPALEHARETGKTVV
ITTNVHQQMRQFVEDARAITDQERLRAVVFRGKGSMCHIDVDYEECQALRDTTRDLVEVE
SDIAELEQREGELLSDGQAGSSEAMEARNAVVEELRDLQDEREEIETERSTCDHYYRNLT
VDTSEFYSWLFDDVRTPDDVYEYAHQQGLCGYELLKEGMDGVDLVVCNYHHLLDPTIREQ
FFHWIGRDPEDIIAVFDEAHNVESAARDHARRTLTENTLDQALDELDNEEDARTDAAANV
IETFRDALVEAYEDSFGFGGREAVDEHWDDITIANDDRKDDLTLAFLQGYTGPGFHEELD
RALELGRDLDARYQKAFKEGELDTRKECQTLQAAGFISDWLDETDETGQYPVVSVRRDDA
TDDVYGRAELYTCIPEQVTRDLFSDLHAAVLMSATLRPFDVTENVVGVEDPVTMAYGAQF
PEERRRTYAVDGPALFSSERDDPQTQQRIARTLEDIVRFTPGNTLVFCPSYSEAERYHDM
TAVSATRYLDEPGTQARDLREAFTDGDDGVLYTSLWGTLGEGVSYDGDDARTVVVVGVPY
PHLDDRMDAVQDAYDVAFGDDEDDAGWRYAVEIPTIRKTRQALGRVVRSPDDFGARILLD
KRYTEAAEMEMHDYAVRGTFPPGERREMVDIGPEKLKFAMLNFYQDMDAYDGPPPNP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttttccccttcgaggagccgtacgaccatcagcaggaggcgatgggaacgata
tacgacgcgctcgaagagggccgcgacgtgctgttcgaaggggcctgcgggaccgggaag
acgctcgcgtcgctggtccccgcgctagaacacgcccgcgagacgggcaagaccgtcgtc
atcacgacgaacgttcaccagcagatgcgccagttcgtcgaggacgccagagcaattacc
gaccaggagcgcctgcgagcggtcgtcttccggggcaaagggtcgatgtgtcacatcgac
gtagactacgaggagtgccaggcgctgcgggacacgacccgtgacctggtcgaggtcgag
agcgatatcgccgaactcgaacagcgcgagggagaactcctttctgacgggcaggctggc
agtagcgaggcgatggaggcccgcaacgccgttgtcgaggaactccgggacctgcaggac
gagcgcgaggaaatcgaaaccgagcgctcgacctgtgaccactactatcggaacctcact
gtcgacaccagcgagttctattcttggctgttcgacgacgttcggacgcccgacgacgtg
tacgagtacgcccaccagcaagggctgtgtggctacgaactactgaaagaaggaatggac
ggcgtcgacctcgtcgtctgtaactaccatcacctgctggacccgaccatccgcgaacag
ttcttccactggatcgggcgcgaccccgaagacatcatcgccgtcttcgacgaggcccac
aacgtcgagtcggccgcccgcgaccacgcccggcggacgcttaccgagaacacgctcgac
caggcgctggatgaactcgacaacgaggaggacgcccggaccgacgctgcagcgaacgtc
atcgagacgttccgggacgcactcgtcgaggcctacgaagattccttcgggttcggcggc
cgcgaggccgtcgacgaacactgggacgatatcaccatcgccaacgacgaccggaaagac
gacctgacactcgccttcctgcaggggtacaccggccccggcttccacgaggaactggac
cgcgcactggaactcggccgcgacctcgacgcgcgctaccagaaggcattcaaagaaggt
gagctggacaccagaaaggagtgtcagaccctgcaggccgccggcttcatttctgactgg
ctcgatgagacggacgaaactggccagtaccccgtcgtcagcgttcgccgcgacgacgcg
accgacgacgtgtacggccgcgcggagctgtacacctgcatccccgagcaggtcactcgc
gacctgttttccgacctccatgccgccgtgttgatgagcgccacgcttcggcccttcgac
gtgaccgagaacgtcgttggcgtcgaggacccggtgacgatggcctacggggcacagttc
cccgaggagcgccgccggacctacgccgttgacggcccggcgctgttttccagcgaacgg
gacgacccacagacacagcaacgcattgcgcgcacgctcgaagacatcgttcgcttcacg
cccgggaacacgctcgtgttctgtccctcctacagcgaggccgaacgctaccacgacatg
accgctgtgagcgcgacccggtatctggacgaaccgggcacgcaggcccgtgacctccgg
gaggcctttaccgacggcgacgacggcgtcctctacacctcgctgtgggggacactgggc
gagggcgtgagctacgacggcgacgatgcccgaaccgtcgtggttgtcggcgtcccgtac
ccgcacctcgacgaccggatggacgccgtacaggacgcctacgacgttgccttcggcgac
gacgaggatgacgcgggctggcgctacgccgtcgagattccgacaattcgcaagacaagg
caggccctcgggcgcgtggtccgctcgccggacgacttcggggcgcgcattctgctcgac
aagcgatacaccgaagccgccgagatggagatgcacgattacgccgtccgcgggaccttt
ccaccgggggaacgccgagagatggtcgatatcgggcccgagaagctcaagttcgcgatg
ctgaatttctatcaggacatggacgcctacgacggaccgccgccgaatccctga
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integrated database retrieval system
