Haloarcula marismortui ATCC 43049: rrnAC2796
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Entry
rrnAC2796 CDS
T00211
Symbol
udg3
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hma
Haloarcula marismortui ATCC 43049
Pathway
hma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
rrnAC2796 (udg3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hma03400
]
rrnAC2796 (udg3)
Enzymes [BR:
hma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
rrnAC2796 (udg3)
DNA repair and recombination proteins [BR:
hma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
rrnAC2796 (udg3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAV47552
UniProt:
Q5UYV1
LinkDB
All DBs
Position
I:complement(2488433..2489020)
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AA seq
195 aa
AA seq
DB search
MEQMDGLDVVGCERCDDLCGSRSRIVNGVGPADADLLFVGEAPGANEDEQGEPFVGRSGD
VLDAGLRDAGLDRGDVRITNCVRCRPPDNRDPRNGELANCRDYLETEIDRVDPEVVVTLG
KVPAEHLLERDVAVTGEAGDVFDVAIAGQPRRVLVSVHPAATLYDPSQKETFEAALTTAA
EFTDAQSGQSRLGEF
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatggacggcctcgatgtcgtcggctgtgagcgctgtgatgacctctgtggc
tcgcgctcgcgcatcgtcaacggcgtcggccccgcggacgcggacctgctgttcgtcggg
gaagcccccggcgcgaacgaggacgaacagggcgagccgttcgtcggccggagcggcgac
gtgctcgacgctgggttacgcgatgccggcctcgaccgcggcgacgtgcgcatcacgaac
tgcgtccgctgtcgcccgccggacaaccgcgacccccgaaacggtgaactcgcgaactgc
cgcgactatctggagacggaaatcgaccgtgttgaccccgaagtcgtcgtgacgctcggg
aaagtgccggccgagcacctgctagagcgtgatgtcgccgtcaccggcgaagcgggcgac
gtgttcgacgtggctatcgccggccagccacggcgcgttctcgtctccgttcacccggcg
gcgacgctgtacgacccgagccagaaagagacgttcgaggcggcgctgacgactgccgcg
gagtttaccgacgcccagagcggccagtcacgactcggcgagttttaa
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