Haloarcula marismortui ATCC 43049: rrnAC2964
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Entry
rrnAC2964 CDS
T00211
Symbol
endA
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hma
Haloarcula marismortui ATCC 43049
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hma03016
]
rrnAC2964 (endA)
Enzymes [BR:
hma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
rrnAC2964 (endA)
Transfer RNA biogenesis [BR:
hma03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
rrnAC2964 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AAV47697
UniProt:
Q5UYF6
A0A4V1EMF6
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All DBs
Position
I:2622899..2623906
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AA seq
335 aa
AA seq
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MELTLEGDVVRAGYEARERFYDSRGYGKVRNGDIDLAPVEAAHLLYRGDIESIDGMDFRG
FLGSAAVSEVDFAVYKDLRDRGFYLTPAREGWVDDAAGADFVVYPRGKGPWDNEVAYRVR
IIGERDTAVATDLGGCVLAVVDEESEVTYLDTDRREVSGTSDAAVPATAGELLGERVVCW
EPPAELYEQAFYGQQLGDDGAVQLSLVEAAYLTQEGMLTVEGGADAVVERGREVEGDRFD
RRLAVYTALRASGVAPKTGFKFGADFRTYADVESAENLGHSELLVRVLPADHRFEPRDLA
LDVRLAHGVRKTMVFALTTDGGDEIEWVAVERLTP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaactgacgcttgagggcgatgtcgtgcgggccggctacgaggcgcgcgagcgcttc
tacgactcgcgcggatacggcaaggttcgtaacggcgacatcgacctggctccggtggag
gccgcacacctcctctaccgcggggatatcgagagcatcgacggcatggatttccggggg
ttcctcgggtcggcggccgtctctgaggtcgatttcgctgtctacaaagacctgcgggac
cgcggcttctatctcacgccggcccgcgagggatgggtcgacgacgctgcgggcgcggat
ttcgtcgtctatccgcgcgggaaggggccgtgggacaacgaggtcgcctaccgcgtcagg
ataattggcgaacgcgatacggctgtggccactgatctgggcggctgcgtgctggcggtc
gtcgacgaggagagcgaagtgacgtacctcgataccgaccgacgcgaggtctccgggacc
agcgacgccgccgtcccagcgacggcgggtgaactgcttggagagcgggtggtgtgctgg
gaaccgccggcggaactgtacgaacaggcgttctacgggcagcaactgggtgacgacggc
gcggttcagctctcgctcgtagaggctgcgtacctcacacaggaagggatgcttacagtc
gagggcggagctgacgctgtcgtcgagcgaggccgcgaggtcgagggcgaccgcttcgac
cgccggctggccgtctatacggcgctgcgagcgagcggcgttgcgccaaagaccggcttc
aaattcggcgcggacttccggacctacgccgacgtcgaaagtgccgagaaccttgggcac
tcagagctactggtgcgagtactgccggctgaccaccgcttcgaaccgcgggacctcgcg
ctggacgtgcggctggcccacggcgtccggaagacgatggtgtttgcgctcacgacagac
ggcggcgacgagattgaatgggtggccgtcgagcggctaacgccctga
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