Haloarcula marismortui: rrnAC3109
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Entry
rrnAC3109 CDS
T00211
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hma
Haloarcula marismortui
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hma03016
]
rrnAC3109
Enzymes [BR:
hma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
rrnAC3109
Transfer RNA biogenesis [BR:
hma03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
rrnAC3109
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AAV47820
UniProt:
Q5UY33
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All DBs
Position
I:2752329..2752892
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AA seq
187 aa
AA seq
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MSKRLFVSVDLDGLGDAVAAVQDRFDGVSGLRLTDPGQAHVTLKFLGDTAPDRVADVVAA
LEAAVEDSGVEPFEADIGGLGVFPSLSYISVVWVGVRDGQGGPELTALHEAIEDRTVAMG
FDSEDHEFTPHATIARMDHAGGKETVQNIVENDDPDVGCLQVTEIRLKESERGPGGPTYR
TVESVSL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgcctgttcgtcagcgttgacctcgacgggctgggcgacgctgtggcggcc
gttcaggaccggttcgacggcgtgtcgggccttcgactgaccgaccccgggcaggcccac
gtcacgctgaagttcctcggtgacaccgcgccggaccgggttgctgatgtcgtcgccgcc
ctcgaagccgcggtcgaagacagcggtgtcgagccgttcgaagccgatatcggcggtctc
ggcgtctttccgtcgctgtcctacatcagcgtcgtctgggtcggcgttcgcgacggtcag
ggcggcccagaactgactgcactgcacgaagctatcgaagacaggaccgtcgcgatgggg
ttcgattcggaggatcacgagttcacgccgcatgcaaccatcgccagaatggaccacgct
gggggcaaagagacagtacagaacatcgtcgagaacgacgaccctgacgtgggatgcctg
caggtcacggaaatccgactgaaagagagtgagcgtgggcctggcggcccgacgtaccgg
accgtcgagtcggtgtcgctgtga
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