Haloarcula marismortui: rrnB0299
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Entry
rrnB0299 CDS
T00211
Symbol
oye
Name
(GenBank) nineteen domain light and oxygen sensing his kinase
Organism
hma
Haloarcula marismortui
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
PAS
PAS_3
PAS_8
GAF_2
HATPase_c
GAF
GAF_3
HisKA
PAS_7
HATPase_c_3
CCB2_CCB4
Motif
Other DBs
NCBI-ProteinID:
AAV48465
UniProt:
Q5UW88
LinkDB
All DBs
Position
II:complement(249216..255131)
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AA seq
1971 aa
AA seq
DB search
MSTDNIAQETTPETVFGRIDEAVFALDTDWQFTYINQQTAALVDRDPATLLGESLWEVFP
DSADSAAFDACHNAVETQEPCHFEMVFGPRDTRFVVHAYPSNDGLTVCLRELTAERERKL
ELQRSQQLFESVFHETEDAIIVADTDRRITDFNPAAERLFGYDASEVIGEKSQLLYADPE
TFERQGDKRFNEQAPQRRDRYVVEYERADGTTFEGETVGTPLKREADGTFAFFATVRDVT
SQLNYKRSIEQRNRALKQFHDITTDEKKPFATQAAAVLKLAVDYLDVETGVIAEIDGQTR
IPRHVFTAGEAATATERRPLDTTFDERVATTRKPFGFHDVKEAEFTEHRAAESGEIAAYL
GVSVTVDDKQYGVLSFTDGGSRASAFSESEETFVRIVAQWAGKEISRRRNQKRANAERER
LRQIIDTIPQQVFVKDADGTYTLANKAAAAAHGVAVERLEGATHDEFALSDEQRDFKSDD
AAVIENGESVHIEEDGLVEADGSSHTVQTDIVPIEIASGERRALVVATDITEQKQLEAQL
EQSKRRLRQIIDMLPQLVFAKDESGTFLLANEAVADAYGTTVDELEGATDAEFADSEAEA
EQFRADDRAVIDSGEPKHISEESLTTTDGIERILSTRKIPYDPVDTPGDAVLGVSTDITE
LKQREAELEMQSAAMEASMDGISVLDDDREYIYMNEAHAAVFGYDPDDLIGSSWRRLYSD
EEVERIRQEVFPELEEHGQWRGETVGRQRDGSPVTQELALSLLDDGKLICTNRDITEQKA
RENVLEQYEALIENMNEAAFIVDDEWRLAYANERTLSLGDVEPRSVLGQDIMELFDGLVT
DKADYKTFNDTLERTLDGEQVNERCELPLQLPTGEYILECLFSPFTSAGEQRAAVVARDV
TARKAREQELERKRARLRALFDESPDGIIVHDENGEIIDTNTTQIDQLGYEELCGVNVAE
FEVGHSRTELRALWSDMALGETRRVEGSHRRKNGSIFPVEVWISKTEVHGEIRFIAISRD
ISDRKAREREMVRNREFLEKTQNIASVGGWEIDLQTDELRWTDEVYRIHDLPLDADVTVE
DGIDYYHPEERPTLNAVFDRLVEEGEPYDEELRIVTAADAVKWVRTVGDPEFDDGEVVGA
RGIFQDITDRKEREQDVQELTERLDLAVEGANLGVWDWDMTTDAVTFNEQWASMLGLSLD
EIAHTLETWEERVHPADMDRVEDALEAHIAGEAELYDCDHRMRTASGEWKWIRDVGEVVE
RDSDGQPTRAVGIHLDITDQKRSENALEEERDMFAQGPAVVFKWQNEPDWPVEYVSENVT
ETFGFTPEELESGDIPYKTLIHDEDMDTVTAEVQANTDTETERFSHDPYRMVTADGEVKW
VTDNTKIIRNDGEITHYLGYLIDITDRKRLEQSLRQSEQSLREMTEVASDTDRGFEGKLA
AILELGCERLNLPYGFLTRIDDGTQHIVEASGSHSELQAGASAPMSKAYCRRTIEQDEPL
TIQNAVEEDWPDDVAYEMFGLGCYVGGKVTVNGELYGTLCFADRDNRDHQFDESERAFVE
LLVQWVRYELAGEAVETKLRELNETAQRLLSASDASEVASTAIESAKRVLGLPMTGIWWY
DEGKDALVPAGLTDEAGALLGTQPTFDGEGSLAWETFESGEVRVYDDLQEVEARFNDDTP
IRSETLVPLGDKGILISGSTEQRAFSETDRGLFEILAATVETALSRAEREQVLRDTRERL
EQSNEELEQFAYAASHDLQEPLRTVSSYLTLLERRNEEVLDDDALEFIDFAVDGAERMRE
MIQALLAYSRVDTRGQAFESTDMDAVFDTVARNLEVNIEESGAVVNVPDAGGHVVGDTNQ
LVQLFQNLVENGIKYSEETPHVDISVVRSDDDTVEYAVSDDGIGMEPSQLDDIFEVFQRL
HTHEEISGTGIGLSMCRKIVDRHSGQIRVKSAPDEGSTFFVTLPAAGEEHE
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgacaatatcgcgcaagaaacaacacctgaaactgtcttcggccgcatcgac
gaggcggtttttgcgctcgatactgactggcagttcacttacatcaatcagcagacggcc
gcgcttgtcgaccgcgacccggcgacacttctcggggagtcgctctgggaggtgtttccg
gacagtgccgactcggccgcgtttgacgcgtgtcacaacgcggtcgagacacaggaaccc
tgtcacttcgagatggtgtttggcccccgtgacacccgattcgtagtgcatgcatacccg
tcgaatgatgggctgaccgtgtgcctccgcgaactgacagcggaacgcgagcgaaaactc
gaactccagcgcagtcaacagctgttcgagtccgtgttccacgagacggaggacgctatc
atcgttgccgacaccgaccgccgaatcactgatttcaatcccgcggcggagcggctattc
gggtacgacgcgtccgaggtcatcggcgagaagtcacagttgttgtacgctgatcccgag
acgttcgagcgccagggtgacaaacggttcaacgagcaagccccgcagcgccgcgaccga
tacgtcgtcgaatacgagcgggcggacgggacaacgttcgaaggagaaacagtcggaacg
ccgctcaaaagagaggcggatgggacgttcgcgttcttcgcgacggtccgggacgtgacg
agccaactcaactacaagcgcagcatcgagcagcgcaatcgcgcgctcaagcagtttcac
gatataacgactgacgagaagaaaccgttcgcgacgcaggcggcggcagtgctcaagctt
gcggtcgactatctcgatgttgaaactggtgtgatagctgagatagacgggcagacgcgg
attccccgtcacgtattcaccgctggggaagcggcaacagccactgagcgacgccccctc
gacacgacgttcgatgagcgcgtcgcgacgacccgcaaaccgtttgggttccacgacgtg
aaggaggcagagttcacagagcaccgtgccgccgaatcgggggagatagcggcgtatctc
ggcgtctcagtcaccgtcgacgacaagcagtacggagtcctcagcttcacggacggaggc
agtcgggcgtcggcgttctcagagagtgaggaaacgttcgtccgcatcgttgcacagtgg
gcgggcaaagagatcagcagacggcgaaatcagaagcgagcgaacgctgagcgggaacga
ttgcggcagataatcgacaccatcccgcagcaggtatttgtgaaggacgccgacggcact
tacacgctcgcaaacaaggccgcggcagcggcccacggcgtcgccgtcgagaggcttgag
ggcgcaacccatgacgaattcgcgctctcggacgaacagcgagacttcaaatcagacgat
gcagcggtcattgagaacggtgagtcggtccacatcgaggaggacggattagtcgaggca
gacggaagctcgcacaccgtccagaccgacatcgtcccaatcgagatcgcgtccggagag
aggcgggccctcgtcgtggcgacggatattaccgaacagaaacagctggaggcgcaactc
gagcagagtaagcggcggttgcggcagataatcgatatgctcccacagctggtgttcgca
aaggatgaatcgggaacgttcctgctggcaaacgaagctgtcgccgacgcgtacgggacc
acggtcgacgaactggagggggcaaccgacgccgagttcgccgacagcgaggcggaggcc
gaacagtttcgggctgacgatcgagccgtcatcgactccggggagccaaagcacatctcc
gaagagtcgctgacgaccactgatggaatagagcggattttatcgacgaggaaaatcccc
tacgacccggtcgacacacccggcgacgccgtgctgggcgtctcaacggacatcacggaa
ctcaaacagcgcgaggccgagctggagatgcagtcggccgcgatggaggcatcgatggac
ggcatctccgtcctcgacgacgaccgtgagtacatctacatgaacgaggcgcacgcggcg
gtgttcggatatgaccctgacgacctcatcgggagttcgtggcgacggttgtacagcgac
gaggaagtcgagcgaatcagacaggaggtgtttccggaactggaagagcacggtcagtgg
cgcggcgagacggtcggacggcaacgcgatgggtcgccggtcacccaggaactagcgctc
tcgctgctcgacgatggcaaactcatctgtacgaaccgtgacatcacggagcagaaagcc
agagagaacgtactcgaacagtacgaggcgctcatcgaaaacatgaacgaggcagcgttc
atcgttgatgatgagtggcgactcgcctacgcaaacgaaagaacgctctcgttgggagat
gtcgagccacgttcggttctcggacaggatataatggaactgttcgacggcttggttacc
gacaaggctgattacaaaacgttcaacgacacattagagcgaacgctcgatggggaacag
gtcaatgagcggtgtgaattaccgctgcaactaccgaccggggagtacattctggagtgt
ctgttctcaccgttcacctccgccggcgaacaacgggcagcagtcgttgcccgtgatgtc
acggcacggaaagcacgcgaacaggaactagagcgcaagcgggcacggctccgggcgctg
ttcgacgagtcgcccgatggcattattgtccacgacgagaacggcgagattatcgacacg
aacaccactcagatcgaccagctcggctacgaagagttgtgcggggtgaatgtcgccgag
ttcgaggtcggacatagccggacggaacttcgtgcactgtggagcgacatggcacttggc
gaaacacgccgggttgaggggagtcaccgtcgtaagaacgggagtatcttcccagttgag
gtctggatatcgaaaacagaggtccacggggagatacggtttatcgccatctctcgtgat
atcagcgatagaaaagcccgcgagcgggagatggtccgcaaccgcgagttcctcgagaaa
acacagaatatcgcgtccgtcggcggctgggaaatcgacctccagacagatgagctgcgg
tggacggacgaggtgtatcgcattcatgacttgccgctcgatgccgacgttactgtcgag
gacggcatcgactactaccatccagaggagaggccgacactcaatgcggtgttcgatcgg
ctggtcgaagaaggcgaaccgtacgacgaggaactgcgcatcgtcactgcggctgatgcg
gtcaagtgggtacggactgtcggtgaccccgagttcgacgacggcgaagtcgtcggggcc
cgtggtatctttcaggacatcaccgatcgaaaggagcgagagcaggacgtgcaggagctg
acagagcgacttgacctcgccgtcgaaggcgcgaatctcggtgtctgggactgggacatg
accacggatgccgtgacgttcaacgagcagtgggcgtcgatgctcggcctctcgttggat
gagattgcccacacgctggaaacgtgggaagaacgcgtccatccagcggatatggaccgt
gtcgaggacgcgctggaggcacatatcgctggggaggcagaactgtacgactgtgaccat
cggatgcggacagcgagtggtgagtggaagtggattcgggacgtcggcgaagtcgttgaa
cgtgattctgacggccagccgacccgtgctgtcggtatccacctggatatcactgaccag
aagcggtccgagaacgctctcgaagaagagcgtgatatgttcgcacagggtcccgcggtc
gtattcaagtggcaaaacgaacccgactggcctgtggaatacgtctcggagaacgtcacc
gagacgtttggcttcacgccggaagagctggagtcgggtgacatcccgtacaagacgctg
attcacgacgaggacatggatacggtcaccgcggaggtgcaagcaaacaccgacaccgag
accgaacggttcagtcacgacccataccggatggtcacggccgacggcgaggtgaagtgg
gtcacggacaacacgaagatcatccgtaacgacggcgagataacgcactatctgggctac
cttatcgatatcactgaccgaaagcgactcgaacagtctcttcggcagagtgagcagtca
ctgcgcgaaatgaccgaagtcgcatccgatacagaccgtgggttcgaaggcaaattggcc
gcgatactcgaactgggctgtgagcgactcaacctgccgtatggctttttgacccgtatc
gacgatgggacacagcatattgttgaggcgtcgggttcccattcagagctacaggccggg
gcatccgcaccgatgtcgaaggcgtactgccggcggactatcgagcaggacgaaccgctc
accatccagaacgcggtcgaagaggactggccggacgacgtcgcgtatgaaatgtttgga
ctgggctgctatgtcggcgggaaagtgaccgtcaacggcgaactctatgggacactctgc
tttgctgaccgcgacaaccgagaccaccagttcgatgaaagcgagcgcgcgttcgtcgaa
ctccttgtccagtgggtgcggtatgaactcgccggtgaggccgtcgagacgaagctccgc
gaactcaacgagaccgcgcagcgactcctgtcggccagcgacgcgtcggaagtcgcgtct
accgctatcgagagtgcaaagcgggtactcggcctgccgatgacgggaatctggtggtac
gatgaggggaaggacgcactcgttccggcgggactaacagatgaagcgggggcgctactg
ggcacgcagccgacgttcgatggagagggatcgctcgcctgggagaccttcgagagcggc
gaggtgcgggtctacgacgacctacaggaagtggaggcacggttcaacgacgacacaccg
atacgctccgagaccctcgtgccgctgggcgataaggggattttgataagtgggtccacc
gaacagcgggcattttccgagaccgaccgcgggctgttcgaaatcctcgctgcgaccgtc
gaaacggcactcagtcgggccgagcgcgagcaggtgttgcgagacactcgcgaacggctg
gagcagtccaacgaagaactcgaacagttcgcgtacgcggcctcccacgacctgcaggaa
ccgcttcggaccgtttcgagctacctcacgctcctcgaacgacgcaatgaggaggtgctg
gacgacgacgcgctggagttcatcgacttcgccgttgacggagccgagcggatgcgggag
atgatacaggcactgctggcctactcgcgtgtcgatactcgcgggcaggcgttcgaatca
accgatatggatgcagtgtttgacacagtcgctcgaaaccttgaggtgaacatcgaagag
tccggcgcggtcgtgaacgtccccgatgcaggcggccacgtcgtcggcgacacgaaccag
ctcgttcagttgttccagaacctcgtcgagaacgggatcaagtacagcgaagaaacgcca
cacgtggatatctctgtcgtccggtccgacgacgataccgtcgagtacgcggtgtccgac
gacggaatcggaatggaaccgagccaactggacgatatcttcgaagtgttccagcgactc
cacacgcacgaagaaatcagcgggactggtatcgggctctcgatgtgccggaagatcgtt
gaccgacattccggccagatacgggtcaaatcggcaccagacgagggctcgacgttcttc
gtgacacttcccgccgcaggtgaggaacatgagtga
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integrated database retrieval system
