Hydrogenovibrio marinus: HVMH_0125
Help
Entry
HVMH_0125 CDS
T06677
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03420
Nucleotide excision repair
hmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HVMH_0125 (uvrD)
03430 Mismatch repair
HVMH_0125 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_0125 (uvrD)
Enzymes [BR:
hmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HVMH_0125 (uvrD)
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HVMH_0125 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HVMH_0125 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBN58531
LinkDB
All DBs
Position
144677..146950
Genome browser
AA seq
757 aa
AA seq
DB search
MDIAYIIEDLNDAQREAVTVDNQHALILAGAGSGKTRVLVHRIAWLTEVMKLSPYNILAV
TFTNKAASEMRSRVEALIGTQAQGLTMGTFHGIAYRLLRTHYREVGLPQSFQILDSDDQK
RVIKRLLKAMELDEAQWPHKQVQAFINSEKEEGRRPHHIDPGHNPFVAKMVQIYQAYEEQ
CQRAGLVDFAELLLRAHELWLKNPEVLAHYQARYQHILVDEFQDTNTLQYAWLRVLAGGR
GKLFIVGDDDQSIYGWRGAKIENIRQFDADFSDVKMVRLEQNYRSTGIILKAANHLISHN
LERMGKNLWSAGDEGQPIKLYEAFNELDEARYLCNQIETWEQQGGSRGDVAVLYRSNAQS
RVIEQALLQAKIPYRVYGGLRFYDRAEIKDVLAYLRLIVNRDDDAAFERVYNHPPRGIGN
KTADQIRETAKLQQVSLWQAAAELSDSVFTARAKTAVSGFLNLVDDLTEACEGQDLKDIV
IKVVSRSGLQLFFEKDKSEQGQSRLENIDELINAVSQFKPRNVLQANEDINDDTPQSAPW
IESEAEALARAEGIEMPAFESALAEFLAEAALEAGEQQADHWESSVQLMTLHSAKGLEFP
LVFMIGLEEGLFPSQQSQEDALRMEEERRLAYVGITRAEQQLVITYASRRRMHGNEFYPQ
PSRFIKEIPPECLEAVRLTNSNHGASGESFGRYGATPFATKIEETGYAVGSRVFHQKFGE
GMVIDTEGAGDHARVQVNFKHAGLKWLVTAFAKLEKL
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcttacattatcgaagatcttaacgatgcgcaacgcgaagccgttaccgtc
gacaatcaacacgccctgattcttgccggcgcaggtagtggcaaaacacgagtccttgtg
catcgtatagcgtggttgacggaagtcatgaagttgtcgccctacaatattctcgcggtg
acctttaccaataaggccgccagtgaaatgcgctccagggtggaagctttgataggaaca
caggcacaaggcctaaccatgggtacctttcatggtatcgcctaccgtttattgagaacg
cactatcgtgaagtcggcttgccgcaatcttttcagattttggattcggatgatcaaaaa
cgcgtcatcaaacgcttattgaaagcgatggagttggatgaagctcagtggccgcacaag
caagttcaagcttttatcaatagcgaaaaagaagaaggtcgccgtccacaccatattgat
cccggtcataacccttttgttgccaagatggtacaaatctaccaagcctatgaagaacag
tgccaacgggcaggtttggttgattttgccgagctgctgttgcgtgcacatgaactctgg
ctgaagaatccagaagtgctggcgcattatcaggcgcgttatcaacatatattggttgat
gaatttcaggataccaatactttgcaatatgcctggttgagagtgcttgccggtgggcga
ggcaagttgtttatcgtcggggatgacgatcagtccatttatggttggcgcggggcaaaa
attgagaatattcgtcagttcgatgccgatttttctgacgtgaaaatggtgcgattggaa
cagaactatcgttcaactggcattattctgaaagcggctaaccaccttatatcccataac
ctagagcgcatgggaaaaaatctgtggagtgccggtgacgaagggcagcccatcaagctt
tacgaagcgttcaatgagttggatgaagcacgctatctttgcaaccaaatcgaaacttgg
gaacagcaaggcggtagccgcggcgacgtggcagtattgtatcgctctaacgcgcaatct
cgtgtgattgaacaggctttgctacaagcgaaaattccttatcgcgtttatggtgggtta
cgcttctatgatcgtgcggaaatcaaagatgtattggcttatctgcgcttgattgtaaac
cgtgatgacgatgcggcatttgagcgggtttataaccatccaccacgaggtattggtaac
aagactgctgatcagattcgagaaacggcaaagttgcaacaggtttcattatggcaagcc
gcggcagagttgagcgatagtgtcttcacggcacgcgccaaaacggcggtatcaggattc
cttaatttggtagatgacttgacggaagcctgcgaagggcaggatttgaaagacattgtc
attaaagtggtttcgcgttccgggttgcagttgttttttgaaaaggacaagtccgaacaa
gggcaaagccgattggagaacattgatgagttgattaacgcggtcagtcagttcaaacca
agaaatgtattgcaggcgaatgaggacattaatgatgacacgccgcaatcggcaccttgg
atagagagcgaggcggaagctctggcgagggcagaaggaatagagatgccagcattcgaa
tctgcgctggcagagtttcttgccgaagcggcgcttgaagctggtgagcagcaagcggat
cattgggagtcttcagtacagcttatgacgctgcattcggccaaggggttagagtttccg
ctggtatttatgattggcttagaagaaggactgtttccgtcgcaacaatctcaggaagat
gctttgcgtatggaagaagagcgtcggttagcctatgtgggtatcacgcgtgcggaacag
cagttggtcattacctatgccagtcgtcgccgaatgcatggtaacgagttttatccacag
ccttcgcgttttattaaagagattcctccggaatgtctggaggcagttcgtcttaccaat
tcaaatcatggtgcttccggtgaaagttttggccgttatggcgccacaccatttgctacc
aagattgaagaaaccggttatgcggttggttctcgcgtgtttcaccagaaattcggtgaa
ggcatggtgatcgacaccgaaggggcaggcgatcatgcccgtgtccaggtcaacttcaaa
catgcaggcttgaagtggctggtgactgcttttgcgaagttagagaaactctag
DBGET
integrated database retrieval system
