Hydrogenovibrio marinus: HVMH_0267
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Entry
HVMH_0267 CDS
T06677
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HVMH_0267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hmar02000
]
HVMH_0267
02044 Secretion system [BR:
hmar02044
]
HVMH_0267
Transporters [BR:
hmar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HVMH_0267
Secretion system [BR:
hmar02044
]
Type I secretion system
Adhesin protein transporter
HVMH_0267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
BBN58673
LinkDB
All DBs
Position
complement(301948..304128)
Genome browser
AA seq
726 aa
AA seq
DB search
MSNTGSNALKTEQTESQDLDFHDPLLDCLVLYCKTQGQNLSSHALVAGLPISDGERLTPE
LFIRAAERAQIHAKFVQRELADIPNLVMPCIINLKDNQACILESISGSQANIIMPDMGGS
LKTVSLKALEKDYLGYAIYLGKKVSQANKKDSLVKKNEGHWFWHTFWDNRTIYRDVIIAS
VVINIFILANPLFVMNVYDRIVPNNAVESLWVLALGISVVYMFDLLLKSLRSYFLEIAGK
KSDVIMSAKLFEHTLDLTMENRQGSIGAFANNLKEFDSIRNFFTSGTIASIVDLPFVIIF
LLVITYIAGAIVLVPMLIIMIILLYSLIMKDRIMSSIEATYEASAQKNAVLIETLTAIET
IKALGVEARSQWKWEQAVGEIAKASIKSKMMQSSIGRMTGFMQQMSTVFIVLAGVYLIKN
GDLTMGGLIATVMLSQRAIGPMGQFANLTASYQQTRTALNSLNDLMKKETERPIGKRFIQ
HPVFSGKIEFNNVTFTYPGDSKEALHEVSFKIEAGDKIGVIGRVGSGKTTIEKLILGFYK
PDSGSILIDGIDITQLDPAALRHNINYVPQEVTLFSGDVRENIAYKAPYIEDDLILRAAK
LAGVDDFIKTHPSGYGLMINEGGTSLSGGQRQSIGVARALLLPAPIYLFDEPTNAMDSST
EMTLIQRLKENTIQNTMIVVTHKMSILQLVDRLIVLDNGRLIADGQKDTVLEALKSGQLN
KQRVDA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaccggatcgaacgcattgaaaacggaacaaaccgaaagccaggatctagat
tttcacgatcccctgcttgattgcttggtcctttactgcaaaacgcagggacaaaacctt
tcaagccatgctctcgtagcaggtttacctatcagcgacggcgaacgactgactccagaa
ttattcattcgagctgccgaacgtgcccaaatccatgcgaaattcgttcagcgtgagctt
gccgacattccaaacctcgtcatgccttgcattattaatcttaaagacaatcaagcatgt
atcctggagtccatatccggcagtcaagccaatatcatcatgccggacatgggcggcagc
ctcaaaacagtttcgttaaaagcgctggaaaaagattacttgggctatgccatctatcta
ggcaagaaagtcagccaagccaacaaaaaagacagcttggtcaaaaaaaatgaggggcat
tggttctggcacaccttctgggacaacagaaccatttatcgcgacgtcattatcgcttct
gtcgtcatcaatattttcatactcgctaacccgctgttcgtcatgaacgtatacgaccgc
attgtgccgaacaatgccgttgaatcgctatgggtgttggcgctcggaatcagtgtcgtg
tacatgtttgacttgttgctcaagtcactgcgctcttatttcctggaaatcgccggaaag
aaaagtgatgtcattatgtcggctaaactcttcgagcatacgcttgatttgacgatggag
aatcgccaaggttccatcggtgcgtttgccaacaacctaaaagaatttgacagcatccgt
aacttcttcacctccggcaccatcgcgtctattgttgatttgccttttgtcatcatcttc
ttattggtaatcacctacatcgctggtgccatcgtacttgttcctatgctgattatcatg
attatcctactctacagtttgattatgaaagatcgcatcatgagcagtattgaagcgacc
tatgaggcatctgcacagaaaaacgcggtactcatcgaaaccctaaccgccattgaaacc
atcaaggctcttggcgttgaagcacgctcacaatggaagtgggaacaggctgttggtgag
atcgccaaagccagcatcaaatccaagatgatgcaaagctcaattggcagaatgaccgga
ttcatgcaacaaatgagtaccgttttcatcgtactggccggggtatatttaatcaagaac
ggtgacttgacgatggggggcttgattgcaaccgttatgctaagtcagcgcgctatcggc
ccgatgggacaatttgcaaaccttaccgcgtcctaccagcaaacacgcaccgccttgaat
tctctgaacgacctgatgaagaaggaaactgagcgcccaattggcaagcgtttcattcaa
caccctgttttcagcgggaaaatcgaattcaacaatgttaccttcacttacccaggcgac
tcaaaggaagcattacatgaggtttccttcaaaatagaagctggtgataaaatcggggta
attggtcgagtcggctcaggaaaaaccaccattgaaaagctgattcttggcttttacaaa
ccggacagtggctcaatcctgattgacggtattgatatcacccaacttgatccagcagcg
ttgaggcacaacatcaattatgtcccgcaggaagtaacgctcttcagtggtgacgttaga
gaaaatattgcctataaagcaccctatattgaagacgacttgattctacgtgctgcaaaa
cttgcgggggtggatgacttcatcaaaacgcacccgtctggatacggcttaatgatcaac
gaaggcggaacttcattatccggcggtcaaagacaaagcatcggtgttgcacgtgcactg
ctattaccggctccaatttacttattcgacgaaccgaccaacgcgatggattcaagcaca
gaaatgacgcttatccagcgcttaaaagaaaatacgattcagaacacgatgatcgtcgtt
actcataagatgagtattttgcagttggtagaccgcttgattgttttggacaacggtaga
ctgattgctgatggtcaaaaagacacggttctagaagccttgaagtcaggacaattgaat
aaacaacgggtagatgcatga
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