KEGG   Hydrogenovibrio marinus: HVMH_0272
Entry
HVMH_0272         CDS       T06677                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
hmar  Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:hmar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hmar03400]
    HVMH_0272 (rep)
Enzymes [BR:hmar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HVMH_0272 (rep)
DNA repair and recombination proteins [BR:hmar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HVMH_0272 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_11 DEAD ResIII AAA_lid_7 SMC_N
Other DBs
NCBI-ProteinID: BBN58678
LinkDB
Position
complement(309110..311146)
AA seq 678 aa
MHSLNKRQLEAVLHVHTPALVLAGAGSGKTRVITEKIAHLIRKHDIKPHNIYALTFTNKA
AREMKERVSKLLKDDPSKGLNVSTFHNLGLNIIRQEYKALGYKSNFSIMDATDTRQIIKD
LLKKQSLDEEALENAQWDISNWKNAHISPQQALEQAEDNLQQARAILYDLYQQQLKAYNA
VDFDDLIGLPVRLFDENREILDKWQNKVRYLLVDEYQDTNAAQYALVKQLVGIQARFTVV
GDDDQSIYAWRGAQPENLSLLKEDFPNLEVIKLEQNYRSSNRILQSANALIANNPHEFEK
SLWSEMGMGDMLRVIACNNENHEAERVISEIIVHKFKNRTQFKDYAILYRGNFQSRLFER
ALREQNIPYKLSGGQSFFDKTEIKDLLSYLKLIVNPDDDAAFLRVVNTPRREIGATTLTK
LASYATQRHVSLFDATQELGLSTVLDEKALKRVSYFGDLVLKWIKDSETLAGTEVIEFIR
KLNEDIEYDNWLRETSNTPRQAEKRMENTRDLFQWIERIIDKAKNEDDEDIMLNKIVSYM
TLMDMLERNEEEVEQNEVTMMTLHASKGLEFPHVFLIGMEEELLPHKQNLESPGLEEERR
LAYVGITRAQRSLTMTYAKKRRKYGEEMRCEPSRFLSELPEDLLDWEGKPGVEISAEEKL
EKGNAALDSLKAMLASNG
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgcattcactcaataaacgtcaattggaagctgttctccatgtccacacccccgcttta
gtgttggcaggtgctggctccggaaaaacgcgggtaatcaccgagaaaatcgcgcacctg
attcgcaagcatgacatcaaacctcacaatatttacgccttgacctttaccaacaaagcg
gcgagagaaatgaaggagcgtgtcagcaaacttctgaaagacgacccgtcgaaaggcctg
aatgtatcgaccttccataaccttggactgaatatcatccgccaggaatacaaagcactg
ggttataagtcaaacttctcgattatggacgcaacggatacccgtcaaatcatcaaagac
ttgctgaaaaaacaatcgctagacgaagaagccttggaaaacgcacaatgggatatttcc
aactggaaaaacgcgcatatttcgccacaacaggcgttggagcaagctgaagacaaccta
cagcaagcacgtgcgattttgtatgacctctaccagcagcaactcaaagcctacaatgcg
gtggattttgatgacctgattggattaccggttcgactgtttgacgaaaatcgcgagatt
cttgataagtggcagaacaaagtccgctatttattggtcgatgagtatcaagacaccaat
gcggcgcagtacgcgttggtaaaacaattggtcggtatccaagcgcgcttcaccgtggta
ggcgatgatgaccaatccatctacgcttggcgtggtgcccaaccggaaaacctgtcatta
ctgaaagaagacttcccgaatcttgaagtcatcaaactggaacaaaactaccgttcgtca
aaccgcatcctgcaatcagctaacgccttgattgccaataacccgcatgaattcgagaaa
tcgctttggtcagaaatggggatgggggacatgcttcgtgtcatcgcctgtaataatgaa
aaccatgaagcggaacgtgttatctccgaaatcatcgtccataaattcaagaaccgcacc
cagttcaaggactatgcaattctgtatcgcgggaatttccaatcacgattatttgagcgt
gcgttgcgtgagcaaaacattccttacaagctatccggtggacaatctttctttgataaa
acggaaatcaaagacctattgtcttacctgaaactgattgtaaacccggacgatgatgcc
gcgtttttacgtgtggtcaacacccctcgacgtgaaattggcgccaccaccttgaccaaa
ctggcaagctacgccacacaacgtcatgtaagtttgtttgatgccacacaagaactcggc
ttgagcacggtgctggatgaaaaggcactaaaacgcgtgagctattttggcgaccttgtt
cttaagtggattaaagactcggaaactttggcggggacggaagtcatcgagttcattcgc
aagctgaatgaagacattgagtatgacaactggttgcgcgaaacctccaacacaccaaga
caagcggaaaagcgcatggagaatacgcgcgatttgttccaatggattgagcgcattatc
gacaaagccaaaaacgaagacgacgaagacatcatgctcaataaaatcgtgtcctacatg
actttgatggacatgctggaacggaatgaagaagaagtcgagcaaaatgaagtgaccatg
atgacccttcatgcctctaaaggtcttgaattcccacatgtattcctcattggtatggaa
gaagaattgttgccacataaacagaacctggaatctccaggcttggaagaagaacgacgc
ttggcttatgtgggcattacccgcgcgcaaagaagcctgaccatgacctatgcgaaaaaa
cgccgtaaatatggtgaagaaatgcgctgtgagcctagtcgcttcttgagcgagttaccg
gaagatttgcttgattgggaaggcaaaccgggtgttgaaatttccgccgaagaaaaactg
gaaaaaggcaatgccgcactagatagcctcaaggccatgctggcctcaaacggctaa

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