Hydrogenovibrio marinus: HVMH_0281
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Entry
HVMH_0281 CDS
T06677
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03030
DNA replication
hmar03430
Mismatch repair
hmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HVMH_0281
03430 Mismatch repair
HVMH_0281
03440 Homologous recombination
HVMH_0281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmar03032
]
HVMH_0281
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_0281
Enzymes [BR:
hmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HVMH_0281
DNA replication proteins [BR:
hmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HVMH_0281
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HVMH_0281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BigA_N
YbjQ_1
Motif
Other DBs
NCBI-ProteinID:
BBN58687
LinkDB
All DBs
Position
complement(317943..319052)
Genome browser
AA seq
369 aa
AA seq
DB search
MNTETPAAKSASSNAQLIFIDKRNQPIKEYIVAVAASDGLDIKGIQIIASPAKGEKALLS
ANLRIPSLEALDFKDTKIVDSIMQNLIVNEDVLSVEAFIERASDDEEVRKSLTRSIKKIR
SKLADLVGEFTSSEVINLLQERRNDAQFKLKEQDQELKGKKVYCIDIEATDVCTSDNADV
IQVSICDLEGNEILNQLINPGYDIPENEKHNITTEMVKDAPFLAQAWDKIHQTLMDADVV
LAYSTESDFAYLQKSAEKKLLTFELDYNLWLDVAKLATDLVGALRWQSEKMYWFYKTPKL
TDAYEKILGKPFPGDAHDALADAQATAELFNAMLVIGRKSQIKAKKPEPVKNTISNNLFA
AAFAQAKRK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagaaacgcccgcggcaaaaagcgctagcagcaatgcgcaactcatttttatc
gacaaacgcaatcaaccgattaaagaatatattgttgcggttgccgcctctgacggattg
gatatcaagggtattcaaatcattgcttcgccagctaagggtgaaaaagcgctattaagt
gcaaatttgagaattccatcactggaagcattggatttcaaagacacgaaaatcgttgat
tcaatcatgcaaaacctgattgtcaatgaagacgtcttgagcgtggaagccttcattgaa
cgtgcgagtgacgatgaagaagttcgtaaatccttaacgcgctccatcaaaaaaattcgc
agtaagttagcagacttggtgggcgagtttacctcttcagaagtcatcaacctgttgcaa
gaacgtcgtaatgacgcgcagttcaagttgaaagagcaggatcaagaactcaaaggcaag
aaagtctactgtattgacatcgaagccactgacgtttgcaccagtgataacgcggatgtg
attcaggtttccatttgtgatttggaaggtaacgagattctgaaccagttgatcaaccct
ggctatgacattccggaaaacgaaaaacacaacatcaccacagagatggtgaaagacgcg
ccgttcctagcgcaagcatgggacaaaatccatcaaacactgatggatgcggatgtggtg
ttggcttacagcacagagtctgattttgcttacttgcaaaaaagcgccgagaaaaaactg
ctgactttcgagttggactataacttgtggttggatgtcgccaaactggcaacggatttg
gtcggggcgctacgctggcagtcggaaaaaatgtattggttctacaaaacccctaaactg
accgatgcttatgaaaagattttaggcaaaccttttccgggagatgcgcatgatgctttg
gcagatgctcaagcgaccgcggaattgttcaacgccatgttggtgattggccgcaaatcg
caaattaaagccaaaaaaccggaaccggtgaaaaacacgatttccaacaacctgttcgca
gccgctttcgcgcaagcaaaacgcaagtaa
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