Hydrogenovibrio marinus: HVMH_0391
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Entry
HVMH_0391 CDS
T06677
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HVMH_0391 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_0391 (ung)
Enzymes [BR:
hmar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HVMH_0391 (ung)
DNA repair and recombination proteins [BR:
hmar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HVMH_0391 (ung)
Prokaryotic type
HVMH_0391 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBN58797
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All DBs
Position
complement(421297..422001)
Genome browser
AA seq
234 aa
AA seq
DB search
MTNTNHMIDLEASWLSKLKQEFDMPYMQQLKAFLLAEKQQGKTILPKGSLWFNALNSTPF
DQVKVVVLGQDPYPTPGHAHGLSFSVLPGVSPLPKSLLNINQELLTDVGVNNAHTGYLQP
WADQGVLLLNAVLTVEAGKPNAHQNKGWEQFTDKIVHLLAENNEHLVFILWGAYAQKKGK
FIDRKKHFVIESPHPSPLSAYRGFFGSQPFSKTNSYLQQHGQTPINWQLPVASS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataccaaccacatgattgacttagaagcatcctggctatcaaaactcaaacaa
gaattcgatatgccctatatgcagcagttgaaggcttttttactcgcggaaaaacaacaa
ggcaaaaccatcttaccgaaaggaagcctttggtttaacgcgcttaactctacgccattc
gatcaagttaaggtagttgtactcgggcaggacccttaccccacacccggacacgcccat
gggttaagtttttctgtactaccgggcgtctctcccttgccaaaatccctacttaatatc
aatcaggagctcttaaccgatgtaggcgtgaacaatgcccatacaggctacttgcagccc
tgggcagatcaaggtgtcttgctactaaatgccgttctaaccgtggaagcgggtaagccc
aacgcacaccaaaacaaaggctgggagcagtttaccgataaaatcgtacatctattggcc
gaaaataatgagcatttggtgttcattttgtggggcgcttacgctcagaaaaaaggaaaa
tttatcgaccgaaaaaaacattttgtgattgagtctccacacccatcacccctttctgct
taccgtggtttttttggtagccaacccttttctaagaccaacagttatttgcaacagcat
ggccaaacaccgataaactggcaacttccagttgcttcatcttaa
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