KEGG   Hydrogenovibrio marinus: HVMH_0393
Entry
HVMH_0393         CDS       T06677                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase 4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
hmar  Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:hmar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hmar03032]
    HVMH_0393 (parE)
   03036 Chromosome and associated proteins [BR:hmar03036]
    HVMH_0393 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hmar02048]
    HVMH_0393 (parE)
Enzymes [BR:hmar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HVMH_0393 (parE)
DNA replication proteins [BR:hmar03032]
 Prokaryotic type
  DNA Topoisomerases
   HVMH_0393 (parE)
Chromosome and associated proteins [BR:hmar03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HVMH_0393 (parE)
Prokaryotic defense system [BR:hmar02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HVMH_0393 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: BBN58799
LinkDB
Position
422858..424744
AA seq 628 aa
MSGNYNASEIEVLTGLDPVRKRPGMYTDTTRPNHLAQEVIDNSVDEALAGYASEIIVTHY
KDGGMSIEDNGRGMPVDIHPEEGVPGVEVILTKLHAGGKFSNKAYQFSGGLHGVGVSVVN
ALSKRVEVEIRRDGVKYQIAFENGNLVEPLTEIGKVGKKNTGTKVTFWPDASFFDTPKYA
LSKLKHLLRAKAVLSPGLQVTFFDEISDEKCEWYYEDGLRDYLNHALDGIERFPVEGFVG
DVNGEHEGVSWAIAWLAEPAEALLESYVNLIPTPQGGTHVNGLRSGATDAIREFCEFRNL
LPRGIKLTPEDVWQNVAFVLSAKVREPQFAGQTKERLSSRECVPFISGVVKDAFSLWLNQ
HTEIAEKIAEIVINNAQSRNKKAKKVTRKKITSGPALPGKLADCTESDINMTELFLVEGD
SAGGSAKQARDKNYQAIMPLRGKILNTWEVDSSQVLASQEIHDISVAVGVDPGSRDLSGL
RYGKVCILADADSDGAHIATLICALFVKHFPALIENGHIYVAMPPLYRVDVGKQVFYALD
EAEREGIIDRIETEKLPGKIQVTRFKGLGEMNPSQLRETTMLPATRRLVQLSMDEAESIP
IMDMMLAKKRSADRKEWLEEKGDLAAVI
NT seq 1887 nt   +upstreamnt  +downstreamnt
gtgagcggaaactataatgcctcagaaatcgaagttctaacagggctggatccagttcga
aaacgccctgggatgtataccgataccactcgacctaaccatttggcacaagaggttatc
gacaactctgtggatgaagcgctagcaggttatgccagtgaaattatcgtcactcactat
aaagatggcggtatgtcgattgaagataatgggcgaggaatgccggtagatatccaccct
gaagagggcgtgcctggtgttgaagttattctcactaagttgcatgcaggtggaaagttt
tccaataaggcctatcagttttcaggtggtttgcacggtgtgggcgtttctgttgtcaat
gccttgtcaaaacgtgttgaggttgagattagacgtgatggtgttaaataccagattgct
tttgaaaacggcaaccttgttgaaccattgacggaaataggcaaagtcggcaaaaaaaat
acaggaaccaaagttaccttttggccagatgccagctttttcgatacgcctaaatatgcg
ctgtcgaagctaaagcatttgctccgtgcaaaagcggtgttgagtcccgggttgcaggta
actttctttgatgaaatcagcgacgaaaaatgcgaatggtactatgaagatggtttgaga
gactatttgaatcatgcgctggatggtattgagcgtttcccggttgaaggatttgttggg
gatgtgaatggggaacatgaaggtgtttcctgggcgatcgcttggttagcagaacctgcg
gaagcgcttttagaaagttatgttaacttgattcctaccccacagggcgggacacatgtc
aacggtttacgctcgggagcgactgatgccattcgtgagttttgtgaattccgtaattta
ttgccgcgtggcataaagctgacgcctgaagacgtttggcaaaatgtcgcatttgttttg
tcagccaaagtgcgagaacctcagtttgctggtcagaccaaagagcgtttgtcttcgcgt
gagtgtgtgccatttatttccggtgtggttaaagatgcttttagtttgtggctgaaccaa
cacactgagattgccgagaaaattgctgaaatcgttatcaataacgcacaaagccgtaat
aagaaagccaagaaagttacccgtaaaaagattacttccggtcctgcattgccagggaag
ttggcggattgtactgagtcggacattaatatgaccgagctattcctggtggaaggagat
tcggccggcggttccgcaaaacaggcacgagataaaaactatcaggcgattatgccgcta
cgtggaaaaattttgaatacttgggaggtagattcctctcaggttcttgcatcacaggaa
attcacgacatcagtgtggctgtgggggttgatccaggttccagagatttgtccggtttg
cgctacggtaaggtttgtattttggcggatgcggattctgatggtgcacatatcgctacc
ttgatttgtgcgctgtttgttaagcatttccctgcgcttattgaaaatggacatatctat
gtcgcgatgccaccgttgtatcgtgtcgatgtcggtaagcaggtgttctatgccttggat
gaagctgaaagagaagggattattgatcgcatagagaccgaaaaattaccgggtaagata
caggtaacgcgattcaaaggtctaggggaaatgaacccttcgcaattacgtgaaactaca
atgttgccggcaactcgtcgtttagttcaactgagcatggacgaagcggaatcaattccc
attatggatatgatgttggcgaagaagcgttcagctgatcgtaaagagtggctggaagaa
aaaggcgacttggctgcggtgatttaa

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