KEGG   Hydrogenovibrio marinus: HVMH_0413
Entry
HVMH_0413         CDS       T06677                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
hmar  Hydrogenovibrio marinus
Pathway
hmar00300  Lysine biosynthesis
hmar00470  D-Amino acid metabolism
hmar01100  Metabolic pathways
hmar01110  Biosynthesis of secondary metabolites
hmar01120  Microbial metabolism in diverse environments
hmar01230  Biosynthesis of amino acids
Module
hmar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hmar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HVMH_0413 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HVMH_0413 (lysA)
Enzymes [BR:hmar01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HVMH_0413 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955 DUF3825
Other DBs
NCBI-ProteinID: BBN58819
LinkDB
Position
complement(445026..446279)
AA seq 417 aa
MSFDAFQYRNNTLHAENVALTELANSYGTPLYVYSRKALESRWTAFDQAFGTQPHLVCYA
VKTNSNLAVLNVLAKLGSGFDIVSQGELERVLKAGGDAKKVVFSGVAKKPSEIRRALEVG
IRCFNIESHAELDRLQEVAESMDKVAPISVRVNPDVDAKTHPYISTGLKDNKFGVDINTA
PALYAKAQSLSHISIQGIDCHIGSQLTEIAPFVDALERVLKLKSDLAAQGIEIHHLDLGG
GLGIQYTDEQPPEIATYIQALLTKLNDPSIEVIIEPGRAIAGNAGVLLTEVEYLKPTDHK
NFAIIDAAMNDLIRPALYQSHQHIQAVTPRTDGEDTSWDLVGPVCETGDFLGKNRTLNLK
AGDFLAVMSSGAYGFTMSSNYNTRPRAAEIMVDGDQAFVIRPRETYEDLMGTETLLP
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgagttttgacgcatttcaatatcgcaacaatacccttcatgccgaaaatgttgctctg
acggaactggcaaacagctatggcacgccgctatacgtttactctcgtaaagcactggaa
tcgcgctggacagcgtttgaccaagctttcggcactcagccacatttagtttgctatgcg
gtgaaaaccaactcaaatctggcggtattgaacgtgctggcaaaactgggatccggcttt
gatatcgtttcacaaggcgaattggaacgtgttctcaaagctggtggtgacgcgaaaaaa
gtcgttttttccggggttgccaaaaaaccttctgaaatccgtcgtgcattggaagtcggc
attcgttgtttcaacatcgaatcccacgccgagctagatcgccttcaggaagtggcagag
tccatggacaaagtcgcgccaatttctgtgcgcgtcaacccggatgtcgatgcaaaaacc
cacccttatatttctacgggtttaaaagacaataaattcggtgtcgatattaatacagcg
cctgcgctgtatgcaaaagcacaatcactatcgcacatttccatccaagggattgattgc
cacattggttctcagttgacggaaatcgcgccttttgttgatgccctggaacgtgtcttg
aaactaaaatctgacttggctgcacaaggcatcgaaatccatcacctagacttaggcggt
ggactagggattcaatacaccgatgagcaaccaccggaaatcgcaacttacattcaagca
ttgctgactaaattgaacgatccaagtatcgaagtcattattgagccggggcgagccatt
gccggtaacgctggcgtattgctgacagaagtggaatatctaaaaccgactgaccacaag
aattttgcgattatcgatgccgccatgaatgatttgattcgtccggcgctttatcaatct
caccagcatattcaagcggtcacaccaagaacggatggtgaagacaccagctgggatttg
gttggcccagtctgtgaaactggcgacttcctaggcaaaaatcgcacgctgaatttaaaa
gcgggtgatttcctagcggtaatgtcttctggcgcctacggcttcaccatgagctcaaac
tacaatacgcgcccaagagcggcagaaatcatggtggatggtgatcaagcctttgtaatt
cgtcctcgtgagacttacgaagacttgatgggaacggaaaccctactgccataa

DBGET integrated database retrieval system