Hydrogenovibrio marinus: HVMH_0667
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Entry
HVMH_0667 CDS
T06677
Symbol
dnaZX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03030
DNA replication
hmar03430
Mismatch repair
hmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HVMH_0667 (dnaZX)
03430 Mismatch repair
HVMH_0667 (dnaZX)
03440 Homologous recombination
HVMH_0667 (dnaZX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmar03032
]
HVMH_0667 (dnaZX)
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_0667 (dnaZX)
Enzymes [BR:
hmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HVMH_0667 (dnaZX)
DNA replication proteins [BR:
hmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HVMH_0667 (dnaZX)
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HVMH_0667 (dnaZX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
ResIII
AAA_30
AAA_19
TsaE
AAA_18
AAA_24
nSTAND3
AAA_assoc_2
AAA_7
Rad17
PIF1
AAA_2
TniB
Sigma54_activ_2
ABC_tran
SKI
Motif
Other DBs
NCBI-ProteinID:
BBN59073
LinkDB
All DBs
Position
735870..738110
Genome browser
AA seq
746 aa
AA seq
DB search
MSYTVLARKWRPKNFSELVGQQHVMQALSNALDQQRLHHAYLFTGTRGVGKTTIARIFAK
ALNCEQGITSTPCGQCPTCRSIDEGRFVDLIEVDAASKTKVEDTRELLENVQYAPVQGRF
KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPHKLPITVLSRCLQFNLMRLTP
TQIQTHLAYILQQEQVPFEESALSMIAKSADGSARDSLSILDQAIAYGGGQVMFEPVQAM
LGLVDQQFVLKILTALLNQSPDEIKAVMVELSRMGVDYEALNHQLIEVFHQLSLIQVLGG
LNDLALVDEAFLHQVAQTLLPEKVQMLYQVALLAQQDMRLAPDVRIGFEMALLRMLAFEP
QTSSGQPSSSVQSNGAKIEVPVATQRSASAQPQSTVAETPVMPQVQSPEQRQPEPASVAA
TVQIAEPQSSMPTPASGTEQDDKDVQHLMSLKEKISQSLGKLRTKSSAKEVETRSAKEAV
MAESSAPSIESVDSSALSGLAVSPITENVGVQIQPVEKASPAQTIESYNLESSLPEEMPQ
VPIEAYSDDFARMELDADEVMADAGVMSSPQVQMNAMVESPEAAPAASPPAPEAENIAAE
SNEIRPEAMLESLTAFNGSGVEEWVRLVQAMNLDGWAGELVNQSMMVSHDQQVLILSVDP
QHASAKSDLALSKLEEAVREKLACELKFIEAEGEHLTPAKYWQQQKALLQQDAVQSIYQD
PNVQGFMEILNMRVIDSSVQSLGDVR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtgagctataccgttctagcccgtaagtggcgtccgaaaaacttttccgaattggtcggt
caacagcatgttatgcaagcgctatccaatgccttggatcaacagcgacttcaccatgcc
tatctgtttactggtacacgaggtgtcggtaagaccactatcgcccgaattttcgccaag
gcgttgaattgtgagcaaggcattacatccacaccttgtgggcaatgtccgacttgtcgc
tctattgatgagggtcgatttgttgatttgattgaagtggatgcggcttctaaaaccaaa
gtggaagatacgcgtgagttattggaaaatgttcaatacgcaccagtgcaagggcgcttc
aaagtttacttgatagacgaagtacatatgctttccaaaagcagtttcaatgctttattg
aaaacattggaagagccaccagagcacgtcaaattcctactggcaacgacagatcctcat
aagttaccgattacggttttatcacgttgtttgcagttcaatctgatgcgattgacgcca
acgcagattcagactcatctggcatatatacttcaacaggaacaagtaccttttgaagaa
tccgctttaagtatgattgcaaaaagtgcagatggttcagctcgggattctttgagtatt
ttggatcaagcaattgcctatggcggtggtcaagtaatgtttgaacctgtgcaagccatg
ttgggattagtcgatcagcaatttgttctgaagattttgacggcgttactgaaccagtct
cctgatgaaatcaaggctgttatggttgaactgtctcgcatgggggttgattatgaagct
cttaatcatcaactgattgaagtattccatcaactgtcattgatacaagttttgggtgga
ctgaatgatttagcgttggtagatgaggcattcctgcatcaggtagcacaaacgctgttg
ccggaaaaggtgcagatgctttatcaagtggctttgctggctcaacaggatatgcgtttg
gcaccggatgtcagaatcggtttcgagatggcgttacttcgcatgctggcttttgaaccg
caaacttcctcaggtcagccttcttcatccgttcagtcaaacggagctaagattgaagtg
cctgttgcgacgcagcgctctgcttctgctcaaccgcaatctacagtggcagaaacacct
gttatgcctcaggtgcaaagccccgaacagcgtcaaccagagcctgcctcagttgctgcc
acagttcaaatcgctgaaccacaatcttcaatgccaacgccggctagcggcacagagcaa
gacgataaagatgttcagcatcttatgagtctgaaggagaagattagtcaatctctggga
aagctccgaactaaatcctctgctaaagaggttgaaacacgctctgctaaagaagctgtt
atggctgagtcatcagcgccgtctatcgagagtgttgatagttctgccttgtcaggttta
gcagtatctcctattacagaaaatgttggtgttcagattcagccggttgaaaaggcgtca
cctgcccaaacaattgagtcttacaacttagaatcgtctctgccagaagaaatgccgcaa
gttcctatagaagcgtacagcgacgatttcgctcgaatggagcttgatgcagatgaagta
atggcggacgcaggtgtaatgagttcaccacaggttcaaatgaacgcgatggttgaatct
cctgaagctgcccccgcggcatctcctcctgctccagaagcagaaaatattgcagcagaa
tccaatgagatacgaccggaagcaatgctggaaagtttgactgcatttaatggcagtggt
gttgaagagtgggtgaggttggtgcaggcaatgaacttggatggctgggcaggtgagctg
gtgaatcagtctatgatggtgtcccatgaccaacaagttctaatactgagtgttgatccg
cagcatgcgagtgctaaatcggatttggcgttgagtaagcttgaagaagccgtgagagag
aaactggcttgcgagttgaaatttatcgaggcagaaggtgagcacctgacgcctgcaaaa
tattggcaacagcaaaaagctttgctgcagcaagatgccgtacaatcgatatatcaagac
cctaatgtccaagggtttatggaaattctaaatatgcgggtgattgattcgtcggtacag
tcacttggcgatgtgcgttga
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