Hydrogenovibrio marinus: HVMH_0722
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Entry
HVMH_0722 CDS
T06677
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00470
D-Amino acid metabolism
hmar00550
Peptidoglycan biosynthesis
hmar01100
Metabolic pathways
hmar01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HVMH_0722 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HVMH_0722 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HVMH_0722 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmar01011
]
HVMH_0722 (ddlB)
Enzymes [BR:
hmar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HVMH_0722 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
hmar01011
]
Precursor biosynthesis
Amino acid ligase
HVMH_0722 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATPgrasp_YheCD
TTL
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BBN59128
LinkDB
All DBs
Position
794761..795702
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AA seq
313 aa
AA seq
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MADHIDVKALGKVAVLMGGTAAEREVSLKSGKAVLDALVSQGVDAEGIDVVSVEQLLDVA
KHYDRVFNVVHGRWGEDGGIQAVLDALDVPYTGSEMAASALTMDKLRTKWLWQGAGLPTP
EFVRVSETQPFDAQGFSLRFPVIVKPCHEGSSIGMRKVENLEQLIEAVDYAQEFDYEVLI
EQWITGREFTCAILDGEALPLIELRTSHSFYDYDAKYLANDTQYICPTDLPVEREVDIQQ
LCLQAFDVAGSRDWGRVDLMMDANGHIWLIELNTVPGMTDHSLVPMAAKAKGISFEQLVV
KLLMLTLKHTKES
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccatattgatgtcaaagcattgggaaaagtggcggtattgatgggcggtacc
gctgcagaaagagaagtttctttaaaaagcggtaaagccgttttggatgcgcttgtgtct
caaggtgtcgatgcagaaggtatagatgttgtttctgttgagcaattattggacgttgcc
aaacactatgaccgagtctttaacgttgtgcatggccgttggggggaagatggcggtatc
caagcggtattggatgcgttggatgtaccctataccggtagtgaaatggcagcgtctgct
ttgacgatggacaagctgcgtactaaatggttatggcagggcgcgggcttgccgacgcct
gagtttgtccgcgtttccgaaacacaaccgtttgatgcccaaggtttttctctgcgtttt
cctgtgattgtgaagccttgtcatgaaggctcgagcatcggcatgcgaaaggtcgaaaat
ttagaacagttaattgaagcggttgattatgcacaagagttcgattacgaagttttgatt
gagcaatggattactggtcgtgagtttacctgtgccattttagatggtgaagctttgcct
ttgattgagcttcggacatcccactctttttatgattatgatgcgaagtatctggcaaat
gacacacaatatatttgtccaacggatttacctgtagaacgggaggtagatattcaacag
ctttgtttgcaggcgtttgatgttgccggttctcgtgattggggaagggttgatttaatg
atggatgcaaacggtcatatttggctgattgagttgaacacggttcccggaatgacagac
cacagcttggtacccatggcggctaaagctaaaggaatcagttttgagcaattagttgtc
aaactgttaatgctgacgctgaaacataccaaagaatcctga
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