Hydrogenovibrio marinus: HVMH_0828
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Entry
HVMH_0828 CDS
T06677
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HVMH_0828 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmar01007
]
HVMH_0828 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmar03016
]
HVMH_0828 (lysS)
Enzymes [BR:
hmar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HVMH_0828 (lysS)
Amino acid related enzymes [BR:
hmar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HVMH_0828 (lysS)
Transfer RNA biogenesis [BR:
hmar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HVMH_0828 (lysS)
Prokaryotic type
Other AARSs
HVMH_0828 (lysS)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBN59234
LinkDB
All DBs
Position
911307..912833
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AA seq
508 aa
AA seq
DB search
MSKTENQSPEQANPVDENKIIAERRAKLNALRSEGHSYPNTFRRQDISTDLHAKYGDISK
EDLAEMEPVRVRVAGRMMLRRIMGKASFATLQDTEGRIQIYVTRDELPEGFYNEQFKKWD
LGDIVGAEGYLFKTNTGELSVHVQQIELITKSIRPLPDKFHGLQDQEIKYRQRYVDLIVN
EESRNRFVLRSKIVQHVREFLIGKGFMEVETPMMHVIPGGATAKPFNTHHNALDMPLYLR
IAPELYLKRLVVGGFEKVFEINRSFRNEGLSTRHNPEFTMVEFYSAYTDYHQLMDYTEEL
LKELAELAIGSTKVPYQGQEFDFGKPFARMSMKESIMHFYPKVTADQLADLESARALAKE
MHVAIDDSYGLGKVITEIFEEHVETKLQDPTFITEYPAEVSPLARRNDQDPFITDRFELF
IGGRELANGFNELNDAEDQAERFKAQVAAKDAGDDEAMHYDEDYIIALEHGMPPTAGEGI
GIDRLVMLFTDSASIRDVLLFPHMRPAD
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaccgagaatcagtcccctgagcaagccaatccggtagacgaaaataaaatt
attgcagagcgtcgtgcgaagctaaatgcattgcgttcagaagggcactcatacccgaat
acattcaggcgtcaggatatttctactgatttacatgcgaaatacggcgatatttcaaaa
gaagacttagcagaaatggaaccggttcgcgtgagagtggcgggtcgtatgatgttgcgt
cgtattatggggaaagccagctttgcaactttgcaagatactgaagggcgtatccagatt
tatgttacgcgtgatgagttgccagaaggtttctataatgagcaatttaaaaagtgggat
ttgggtgatatcgtcggtgcagaagggtatttgttcaaaaccaataccggcgagctatcg
gttcatgtgcagcaaatcgagttgattaccaaatctattcgcccgttgccggataagttc
catggcctgcaagaccaagaaatcaaataccgtcaacgttatgttgatttgattgtgaat
gaagaaagtcgtaaccgctttgtattacgttcaaaaatcgttcagcacgttcgtgaattt
ttgattggcaaagggttcatggaagttgaaacaccaatgatgcacgtcatcccaggtgga
gcaaccgctaagccttttaacactcaccacaatgcgctggatatgccgttgtatttgcgt
attgcgccagaactttatctaaaacgtttggttgtcggtggttttgaaaaagtattcgaa
atcaaccgtagcttccgtaatgaaggtttgtctacaagacacaatccagagttcaccatg
gttgagttctattcagcttatactgactatcatcagttgatggactacacagaagagctt
ttaaaagagttggcggagttagctattggttcgactaaagtgccttatcaagggcaagag
ttcgactttggtaagccatttgctcgaatgagcatgaaagaatccattatgcacttctat
ccaaaggtcacagcagatcagttagcggatttggagtcggcacgtgcgttggcgaaagaa
atgcatgttgctatcgatgactcttatggtttgggtaaagtgattaccgaaattttcgaa
gaacatgttgagaccaagctgcaagatccaacattcattactgagtaccctgcggaagtt
tcaccgttggcgcgtcgtaatgaccaagacccatttatcacagatcgttttgagttgttt
atcggtggaagagagttggcgaatggctttaacgagttgaacgatgcggaagatcaagct
gaacgcttcaaggcgcaggttgctgcgaaagatgccggtgatgatgaagcaatgcattat
gatgaagactatatcatcgcgctagagcatggtatgccgccaacagcgggtgaagggatt
ggtattgaccgtttggtaatgttgtttaccgattctgcctccattagagatgtattgttg
ttccctcacatgaggccagctgactaa
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