KEGG   Hydrogenovibrio marinus: HVMH_0836
Entry
HVMH_0836         CDS       T06677                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hmar  Hydrogenovibrio marinus
Pathway
hmar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hmar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HVMH_0836 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hmar03019]
    HVMH_0836 (rnc)
   03009 Ribosome biogenesis [BR:hmar03009]
    HVMH_0836 (rnc)
   03036 Chromosome and associated proteins [BR:hmar03036]
    HVMH_0836 (rnc)
Enzymes [BR:hmar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     HVMH_0836 (rnc)
Messenger RNA biogenesis [BR:hmar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HVMH_0836 (rnc)
Ribosome biogenesis [BR:hmar03009]
 Eukaryotic type
  90S particles
   RNase
    HVMH_0836 (rnc)
 Prokaryotic type
  rRNA processing factors
   HVMH_0836 (rnc)
Chromosome and associated proteins [BR:hmar03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     HVMH_0836 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: BBN59242
LinkDB
Position
921308..922003
AA seq 231 aa
MSEREKQAKLKRLAKALGYDYQDMGYLERALTHRSVGAKNNERLEFLGDSLVNFMIADAL
FHQFEKISEGDLSRIRAFLVKGETLAKIGKEYQLSDYLMLGPGELKSGGYRRESIIADAV
EAIIASVYEDGGLEPCRDLVSRLYKKRLEELEPEKVGKDPKTRLQEFLQSHHQQLPEYSV
ISVNGPAHAQEFIVSCYVAQLNRKFEATATNRRKAEQLAAEQALDVLENQS
NT seq 696 nt   +upstreamnt  +downstreamnt
atgtctgaacgcgaaaagcaggcaaagttaaaaagacttgctaaagcactgggttacgac
taccaagatatgggctatcttgaaagagcgttaacgcaccgtagcgttggcgctaaaaat
aacgagcgcttggagtttctgggtgatagcttagtgaacttcatgattgcggatgcactt
tttcatcagtttgaaaagatttctgagggtgacttgagccgaattcgcgcttttttggtt
aagggtgaaactctcgccaaaattggaaaagaataccagttgtctgattacttgatgtta
ggccctggtgagctgaaaagcggtggttatcgtcgagaatccattattgccgatgctgtc
gaagcgattattgcatcggtttatgaggatggtggtttagagccttgccgggatttggtt
tcaagattgtataagaaacgcctggaagagcttgaaccggaaaaagtcggtaaagaccca
aagacacgtttgcaggagtttttgcagtctcaccatcagcagctacctgagtacagcgtt
atcagtgtgaacggtcctgctcatgcacaagaatttattgttagttgttatgttgcgcag
ttaaaccgaaagtttgaagcaacagctaccaatagaagaaaagcggaacagcttgccgca
gaacaggctcttgacgttctggagaatcaatcatga

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