Hydrogenovibrio marinus: HVMH_0838
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Entry
HVMH_0838 CDS
T06677
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HVMH_0838 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_0838 (recO)
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HVMH_0838 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HVMH_0838 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BBN59244
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Position
922933..923664
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AA seq
243 aa
AA seq
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MALEIQQQAYVLHKRPYRETSLLVTFLTAEKGRQNAVVKGVRSNSKSSRVKQAWLQPFQS
LNISWAERSVHQSDLVNLRLLEPASVRFPLVGDANICGLYLNELLYRLLYPRVTSESIFE
DYQQALLGLARAQDRNEQAWVLRQFEFQLLNDLGYGFDLSSDAAGNEIDEGKQYKFVPEL
GFVELSGLVEIQGTTISGRCILRFLAEDYSPDCANAIKQFFRQVLAYYLGNKPIQTRALF
QGN
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttggctttagaaatacagcagcaagcctatgtattgcacaaaagaccttaccgtgaaacc
agcttgttggtcacttttttaactgcggaaaaaggccgccaaaatgcggttgtgaagggt
gttcgtagcaactctaagtctagtcgtgttaagcaagcttggttgcagccatttcaaagt
cttaatatcagttgggcggagcgttcggtacatcaatccgacttggttaacctgagatta
ttggaacctgcatcagtacgtttccccttagttggcgatgccaatatttgcgggctatac
ctgaatgagctgttatatcgtctgctttatcctcgcgtgacctctgaatccatttttgaa
gattatcagcaagctttgcttggtttggcaagggcacaagaccgcaatgagcaagcgtgg
gtattacgacaattcgagtttcaactgttgaatgacttgggctatggttttgatttgtcc
agcgatgcggcgggtaatgagattgatgaaggcaagcaatataaatttgtaccggaactc
ggttttgttgagctttctgggttggttgaaattcaagggacgacaatttcgggacgatgc
attttgcgatttttggcggaagattattctccggactgtgcgaatgctatcaaacaattt
ttcagacaggtattggcctattacctgggaaataaacctatccaaacccgtgcgttattt
caggggaattag
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