Hydrogenovibrio marinus: HVMH_0868
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Entry
HVMH_0868 CDS
T06677
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HVMH_0868
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_14
AAA_5
Sigma54_activat
AAA_30
AAA_33
Mg_chelatase
AAA_16
AAA_22
Sigma54_activ_2
AAA_17
ResIII
AAA_28
IstB_IS21
AAA_2
AAA_18
NB-ARC
nSTAND3
AAA_3
AAA_11
ABC_tran
Parvo_NS1
AAA_24
DNAX_ATPase_lid
Cytidylate_kin
TniB
RNA_helicase
TIP49
SKI
Cdc6_lid
TsaE
NACHT
DUF815
RsgA_GTPase
NPHP3_N
DUF5906
Motif
Other DBs
NCBI-ProteinID:
BBN59274
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Position
949651..950964
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AA seq
437 aa
AA seq
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MSYKPLSDRLRPTELAHYVGQKHLLGSNRALSKLLNSGRLHSMIFWGPPGTGKTTLARLI
AQQSDLQFISLSAVLDGVKSVREAVGQAKLHQAQFNQGTLLFVDEVHRFNKAQQDAFLPY
IEDGTFIFIGATTENPSFELNNALLSRARVYVLRPLEQEDLMQVLQRGIELLSEDLGTTL
ELEPQAEELLVQYADGDARRLLNMLEQAVDFAEQNLPGRVVLTADHCREVVQGGVRRQDK
GGELFYDQISALHKSIRGSDPNAALYWLTRMLETGVDARYLSRRLIRMASEDIGNADVKA
LGLCLDAAEAYERLGSPEGELALAQAAVYLAVAPKSNAVYMGYKAAVRDIQEHGTSEVPL
HLRNAPTKLMKNLDYGEGYRYAHDEPEAFAAGECYFPEDMPERDYYQPVPRGLEIKIGEK
MTRLKQMNLQSPQKRRP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagctataagccactttccgacaggcttcgaccaaccgagctagcacattacgtcggg
caaaagcatttgctcgggtcgaatcgtgccttgtctaaactgttaaattctggtcgcttg
cactccatgattttttgggggccgccgggcacaggcaaaaccacgctggcaagattaatc
gcgcagcaatcggatttacagttcatcagtttgtctgcagtactggatggggtgaaatca
gtacgtgaggcggttgggcaagccaagcttcaccaagcgcagtttaatcaaggcactttg
ttatttgttgatgaagttcatcgcttcaataaagcgcagcaagatgcgtttttaccttat
attgaagatggcaccttcatcttcatcggggcgacgacagaaaacccgtcatttgagctt
aataacgctttgctttcacgagcacgtgtctatgtgttgagaccgctggaacaagaagat
ttgatgcaagtattgcaacgcggcattgaacttctgagtgaagacctgggtacaaccctt
gaattggaaccacaagccgaggagttgttggtgcaatatgcggatggcgatgcacgacgc
ttattgaatatgttggagcaggcggtcgatttcgccgagcaaaatctgccaggtcgggtg
gtgctgactgccgaccattgccgagaagtcgtgcagggtggtgtacgccgtcaagacaaa
ggcggtgagttgttttatgatcagatttccgcattgcataaatccatacgtggctcagat
ccaaacgctgcattatattggctgacgagaatgttggaaacaggggttgatgcccgttat
ctttccagacgattgattcgcatggcgagtgaagatattggtaatgctgatgtgaaagct
ttaggcttgtgcttggatgcggcggaagcctatgaacgactcggttctccagaaggtgaa
ttggcgttggcacaagcggcggtttaccttgcggtcgcccctaagtccaatgccgtttac
atggggtataaagctgcggtaagagacattcaggagcatggtacctccgaagtgccattg
cacttgcgcaatgcgccgaccaaattgatgaagaacctagattatggcgaaggctaccgt
tatgcgcatgacgaacctgaagcctttgctgcgggagaatgctatttccccgaagacatg
ccggaacgcgattactaccagccagtgccgagagggttggagataaaaattggcgagaaa
atgactcgactcaaacaaatgaatttgcagtcaccacaaaaaagacgaccataa
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