Hydrogenovibrio marinus: HVMH_0872
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Entry
HVMH_0872 CDS
T06677
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00260
Glycine, serine and threonine metabolism
hmar00630
Glyoxylate and dicarboxylate metabolism
hmar00670
One carbon pool by folate
hmar00785
Lipoic acid metabolism
hmar01100
Metabolic pathways
hmar01110
Biosynthesis of secondary metabolites
hmar01200
Carbon metabolism
Module
hmar_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HVMH_0872 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HVMH_0872 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HVMH_0872 (gcvP)
00670 One carbon pool by folate
HVMH_0872 (gcvP)
Enzymes [BR:
hmar01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
HVMH_0872 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
BBN59278
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Position
953177..956014
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AA seq
945 aa
AA seq
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MSGKIADLMTTDNFSQRHIGSNNEQQQLMLSALGYNSLEQLLDGVVPKSIRRQSEMALGE
GLSEHDALAKLKAMASQNQTIKSFIGMGFYNTLTPPVVLRNVLENPAWYTAYTPYQAEIS
QGRMEAMLNFQTMIADMTGMELANASMLDEATACAEAMTLCQRMSKSKGNVFFVAEDCHP
QNIEVLKTRAEPLGIEVVVGNPEDGFADLELFGVLLQYPGTYGDVKELSAIIDEAHEKKA
LVAVATDLLALTLLKSPGEMGADVAIGNSQRFGVPLGYGGPHAAFMATKDDFKRSMPGRL
IGVSVDRLGNPAYRLALQTREQHIRREKATSNICTAQALLAVMASFYAAYHGPEGLKRIA
NKVFQLTAAFADALNKTGIKVQNTTYFDTVSFEVASADATLQIAEQAGYNLRKINDTLIG
VSFDESTTLEDVTTLLSVLKASTEIADNTPYALPAKLQRTSDFLTHEVFNRYHSETEMMR
YMRHLADKDLALDRAMIPLGSCTMKLNAAAELMPVSWKEFSGIHPFAPLHQVQGYQQMIE
DLERMLCEATGYDAVSLQPNSGAQGEYAGLLAIRAYHESRGEGHRDICLIPASAHGTNPA
SAHMAGMKVVVVKTSEKGDIDLADLQAKCEQHGQNISAIMITYPSTHGVFEEDVKTVCDM
VHQQGGQVYIDGANMNAMVGVSSPGEFGGDVSHLNLHKTFAIPHGGGGPGVGPIGVGKHL
APFLPRTPKQDSSVGQVSAAPWGSAGILPISWMYIAMMGKTGLYQATANAILNANYIAHR
LAPHFPILYTDKNGHVAHECIVDLRPIKAESGITVDDIAKRLIDYGFHAPTMSFPVAGTL
MIEPTESESQVELDRFCDAMIQIKYEIAQVMEGQFTAEDNPLVNAPHTALEVTGDYWAHS
YSRQQAAYPLESLKREKYWSPVARVDNVYGDKNLVCSCLPVSAYE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaaattgcagacttgatgacgaccgataattttagtcagcgtcacattggt
tcaaataacgagcaacaacaattaatgttgtctgcattaggttataactctcttgagcag
cttttggacggggtggtacctaagtctattcgtcgtcagtctgagatggcgcttggtgaa
ggtttgtcagagcatgatgctttggcaaaactcaaggctatggcaagccaaaatcaaacg
attaaatcttttatcggcatggggttctacaataccctaacgccgccggtggtgctacgt
aacgtattggaaaatccggcttggtacacagcctatacaccttaccaagcggaaatctct
caaggtcgaatggaagccatgttgaactttcagaccatgattgctgatatgaccggcatg
gagcttgccaacgcttccatgttggatgaggctacagcctgtgccgaagccatgacttta
tgtcaacgcatgtcaaaatcgaagggcaatgtgtttttcgttgcagaagattgtcatccg
caaaatattgaagtactgaaaacccgtgctgaaccattgggtattgaagtggtggttggc
aatccagaagacgggtttgcagacttggaattgttcggtgttttgctgcaatatccgggt
acctatggtgatgtaaaagagctatctgccattatcgatgaagcgcatgaaaagaaagcc
ttggttgccgttgcaacagacttgctagcactgacgttgttgaaatccccaggtgaaatg
ggggcggatgtcgccattggtaactcacaacgctttggcgtgcctttagggtatggcgga
ccacatgctgcctttatggcaaccaaagatgactttaaacgttccatgccggggcgtttg
attggggtatctgtcgatcgtttaggcaatccggcttatcgcttggcactacaaacgcgt
gagcaacatatccgtcgcgaaaaagcgaccagtaacatttgtaccgcacaagcactcttg
gcggtgatggcgagcttttacgctgcttatcatgggccagaaggtctaaaacgtatcgcc
aataaagtctttcagctaaccgcagcttttgctgatgcgctcaataaaacaggcatcaag
gttcaaaataccacttactttgatacggtctcttttgaagtcgcttctgctgatgcgact
ttgcaaatagctgagcaagcaggttataacttaagaaaaattaacgatacgctaattggg
gtatcttttgatgaatccacgactttagaagatgttacaaccctattgagtgtgttgaaa
gcatctacggagattgcggataacacgccatatgctttaccagcaaaactacagcgcaca
tcagattttctaacgcatgaagtctttaaccgttatcactctgaaacggaaatgatgcgc
tacatgcgtcatcttgccgataaggatttggcgctagatagagcaatgattccgctaggg
tcttgtaccatgaagttgaatgctgctgcagaattgatgccggtatcttggaaagaattc
agcggaatccatccttttgcccctttgcaccaagtgcaaggctatcagcaaatgattgaa
gacttggagcgcatgctttgcgaagccacaggctatgatgcggtttccctacaacctaac
tcaggcgcacaaggcgaatatgccggtttgttggcgattcgagcttaccatgaaagccgt
ggcgaagggcatcgtgatatctgtttgattccagcctccgctcacggaaccaatcctgcc
tctgcacacatggcagggatgaaggttgtggtcgttaagacgtctgaaaaaggcgatatt
gatcttgctgatcttcaagccaagtgtgagcagcacgggcaaaatatttctgcgattatg
attacctatccttcaacgcatggtgtgtttgaagaagatgtgaaaactgtctgtgacatg
gtacaccaacaaggtggacaggtttatatcgatggtgccaacatgaatgcgatggttggg
gtttcatcaccgggtgaatttggtggtgatgtttcccacttgaaccttcacaaaaccttt
gccattccacatggtggcggtgggccaggtgtcggaccaatcggtgtgggtaaacatctt
gcaccttttttgccgcgcacgcctaagcaggattcaagtgtaggacaggtttctgccgct
ccttggggaagtgcagggattttgccaatcagttggatgtatatcgccatgatgggtaaa
accgggctgtaccaagcaactgccaatgcaattttgaacgccaactatattgcgcatcgt
ttggcgccgcatttcccgattttgtataccgacaaaaacggtcatgttgctcatgagtgt
attgttgatttacgtccaatcaaagcagaatcaggcattactgtcgatgacattgccaaa
cgtttgattgactatggcttccacgcacctaccatgtcgttcccagttgcaggaaccttg
atgattgagccgaccgagtcggaatcacaagtggagttggatcgtttctgtgacgctatg
attcaaatcaaatacgaaatcgcacaagtgatggaagggcagtttactgcggaagataat
ccattggtgaatgcgcctcataccgctctggaagtcacaggcgattactgggcgcacagt
tactcaagacaacaggcggcttatccgttggaaagcttgaagcgtgaaaaatactggtca
ccggtggcaagggtcgataacgtttatggtgataagaatcttgtgtgctcttgtttgcca
gtatcggcttatgagtaa
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