Hydrogenovibrio marinus: HVMH_0933
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Entry
HVMH_0933 CDS
T06677
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmar03016
]
HVMH_0933
Enzymes [BR:
hmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HVMH_0933
Transfer RNA biogenesis [BR:
hmar03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HVMH_0933
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BBN59339
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All DBs
Position
997072..997626
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AA seq
184 aa
AA seq
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MRIFIGIEVCDGELKDAMLSWQHNADPFLGERWRMTKPYNFHLTLRFLGQVEAAQVESII
ENLPGWVSDCKALSVGSKKLNLLPSDDKVRVVTLAFENSQALQDMADRVNAGLMRLGFDA
PDLPFLPHITLARHKGKPLKGFDITGVEWHQNNEVHLVVDSVSVFSSESSSSGVVYRPLF
SINI
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttttatcggtattgaagtttgtgatggtgaattgaaagatgctatgttgtct
tggcagcataatgcggatccttttttaggggaaagatggcgcatgacaaaaccatacaac
tttcatctaacgctgcgatttctggggcaggttgaggctgctcaggttgagagcataatt
gaaaatctaccaggttgggtatctgactgcaaagctctgagtgtggggagtaagaagtta
aatcttttacctagtgatgataaggtgagggtggtgacattggcgtttgaaaactctcag
gcattgcaagacatggcggatagagtcaatgctggactgatgaggttagggtttgatgcg
ccagatttaccctttttaccgcatatcacgcttgctcgtcataagggcaagcctttgaaa
gggtttgatataacaggggtagagtggcatcaaaataacgaggttcatttggtagttgat
tcagtctcggtgtttagtagtgagtcgtcatcaagtggtgttgtttatcgtccgttgttt
agtatcaatatttag
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