Hydrogenovibrio marinus: HVMH_0986
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Entry
HVMH_0986 CDS
T06677
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HVMH_0986 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hmar03032
]
HVMH_0986 (dnaB)
Enzymes [BR:
hmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HVMH_0986 (dnaB)
DNA replication proteins [BR:
hmar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HVMH_0986 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
nSTAND3
TsaE
KTI12
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BBN59392
LinkDB
All DBs
Position
1050121..1051545
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AA seq
474 aa
AA seq
DB search
MSEESLFKTPPHSIESEQSVIGGLMLDNEKFEDVAVQLHEQDFYTQQHQVIYAAITQLHQ
AGKPFDLVTVLEKLHSTGKLQDAGDKQYLMDLVTNTPGAVNIHFYADIVREKAILRSLIH
ASNEISEASYFPQGRDVREILDLSERKIMGIAEHGAGEQREYQTLTSLLSSAVNTIDQRF
NSDGSITGLETHLAEFDGVTSGLQNGDLIIVAGRPSMGKTTFSMNIAENAAVKSLAPVAV
FSMEMPAEQLVLRMISSIGHIDAERIRKGNFEPEDFTSLNRAVTVLSQAKMYIDDTPALM
ITDLRARARRIDKDIRDEQYKQAVAEGKENPESHVTGIGLIVIDYLQLMRGSTNTDNRVN
EISEISRGLKAIAKELNVPVIALSQLSRNLENRPDKRPKMADLRESGAIEQDADLIIFIY
RDEVYNPDTQDKGTAEIILGKHRNGALANVRLAFLGKYTKFENFAHMDLDDDPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaatccttatttaaaaccccacctcattccatagagtcagagcagtccgtt
atcggcggcttgatgcttgataatgagaagtttgaggatgttgccgtccagttgcatgag
caggatttctacactcagcagcaccaagttatctatgcggcaattacccagttgcatcaa
gccggtaagccatttgatttggtaacggttctggaaaagcttcactccaccggtaagtta
caggacgcgggtgataagcagtatttgatggatttggtgacgaatacgccaggcgccgtc
aacatccacttctatgcggatatcgtgcgtgagaaagccattttacgttcattgattcac
gcatccaatgaaatttccgaagccagctatttcccacaaggtcgtgatgttcgcgagatt
ttggacttgtccgagcgcaaaatcatgggtattgccgagcatggcgctggtgaacaaaga
gaataccaaacccttacttcattgttgagttcagcggtcaataccattgaccagcgtttc
aattcggatggttcgattactggtctggaaacccatttggccgagtttgacggtgtgact
tccggtttgcaaaacggtgatttgattatcgttgccgggcgtccttcgatgggtaaaacc
actttctcgatgaacattgcggaaaatgccgcggttaaaagccttgcgcctgtcgcagtg
ttcagtatggagatgcctgccgagcagttggtgctgcgtatgatcagttctatcggtcat
atcgatgcggaaagaattcgtaaagggaactttgaaccggaagatttcaccagcctgaac
cgtgcagtgacagtattgtctcaagccaaaatgtatattgatgatacgcctgcgctgatg
attaccgacttgagagcgcgcgctcgtcgtattgataaagacattcgtgatgagcagtat
aaacaagcagtggcagaaggtaaggaaaaccctgaaagtcatgtcacgggtatcggtttg
atcgtaatcgattacttgcagttgatgcgcggttccaccaataccgacaaccgtgtaaac
gagatttccgaaatttcgcgtggtttgaaagccattgccaaagagttgaatgtacccgtt
attgccctgtctcagttgagtcgtaacttggaaaaccgcccggacaaacgtccgaaaatg
gcagatttgagggaatccggagccatcgagcaggatgcggatttgatcatcttcatctat
cgtgatgaagtgtataacccggatacccaagacaaaggtactgcggaaattattcttggg
aaacaccgtaacggtgctttggcaaacgtgcgcttggccttccttggtaagtacaccaag
tttgagaacttcgcccatatggatttggatgatgatccttattaa
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