Hydrogenovibrio marinus: HVMH_1005
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Entry
HVMH_1005 CDS
T06677
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HVMH_1005 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmar01007
]
HVMH_1005 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmar03016
]
HVMH_1005 (cysS)
Enzymes [BR:
hmar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
HVMH_1005 (cysS)
Amino acid related enzymes [BR:
hmar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
HVMH_1005 (cysS)
Transfer RNA biogenesis [BR:
hmar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HVMH_1005 (cysS)
Prokaryotic type
HVMH_1005 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1f
CysS_C
tRNA-synt_1
tRNA-synt_1d
DUF5615
Motif
Other DBs
NCBI-ProteinID:
BBN59411
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All DBs
Position
1068247..1069623
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AA seq
458 aa
AA seq
DB search
MSLQIYNTETRQKETFKPIHDNEVGIYVCGVTVYDYCHIGHARVMVVFDTVVRHLRALGY
NVTYVRNITDIDDKIIKRALENGESIQSLTGRFIDAMHEDEAAMNVLRPDIEPLATEHMQ
DIESMISTLIEKGHAYPAENGDVYFNVKSDEDYGRLSGKNIDDLESGARVEVNEVKKDPL
DFVLWKASKENEPAWSSPWGEGRPGWHIECSAMSTKCLGNHFDIHGGGMDLSFPHHENEI
AQSECATGEHYVNTWMHCGFVRVDDEKMSKSLGNFFTIREVLKLYHPEVIRYFLLASHYR
SPVNYSEDNLEVAKSSVSRLYSALESFTPEQLTAAEEGTNYEVEFNDAMNDDFNTPQAMA
VLFELAKEVNKTKSETLGGLLKKLANQIGLLEQDATVFFKSQPSQSDLTDDAIQSLIDER
AEARKNKDFARSDQIRDELLAQGIELLDSPQGTTWRKV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccttacagatttacaacacggaaacccgtcaaaaagaaacctttaaaccgatccac
gacaatgaagtcggtatctatgtttgtggggtgacggtttacgattattgtcacatcggt
cacgcacgtgtcatggtcgtttttgatacggttgtgcgccacctgagagcgttgggttat
aacgtgacctatgtgcgaaatattaccgatatcgatgacaagatcattaagcgtgcattg
gagaatggtgaaagcatccaatctttgacgggtcgttttatcgatgccatgcacgaagac
gaagcggcgatgaatgttttacgtcccgacatcgagccacttgcgacagagcacatgcaa
gatattgagagcatgatttcgacgttgattgaaaaagggcatgcttatccagcggaaaac
ggtgatgtttatttcaatgtgaagtctgatgaagactatggccgcttgtcgggtaaaaac
atcgatgacttggaatccggtgctcgcgtcgaagtgaatgaagttaaaaaagatcctttg
gattttgtgctttggaaagcttcaaaagaaaacgaaccggcttggtcttcaccttgggga
gaagggcgtccgggttggcatatagaatgttcggccatgtctaccaaatgtctaggcaac
cacttcgatattcatggtggggggatggatttgagtttcccgcatcatgaaaacgaaatc
gctcagtcggaatgtgcgacgggcgagcattatgtgaatacatggatgcattgtggtttt
gtacgcgtggatgacgagaagatgtccaagtctttgggtaactttttcaccattcgtgaa
gtgttgaagttgtatcacccggaagtgatccgttatttcctattggcgagtcattaccgc
agccctgtgaattattcggaagataatttagaagtcgcgaagtccagtgtgtcgcgctta
tattcggcattggaaagctttacgccagaacagttgaccgccgccgaagagggtacaaac
tatgaagttgaattcaacgatgcgatgaacgacgacttcaatacccctcaggcgatggca
gtgttgtttgagttggcgaaagaagtgaataagaccaagtctgaaacgttgggcggtttg
ttgaaaaaactggcgaaccaaattggtttgttggagcaggatgcaactgtattctttaaa
tctcagccttcacaatcagatttgacggatgatgcgattcagtctttgattgatgagcgc
gcggaagcaagaaagaataaagattttgctcgttcggatcaaattcgtgatgaattgtta
gcgcaaggaattgagttgctagattctcctcaaggtactacttggagaaaagtgtga
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