Hydrogenovibrio marinus: HVMH_1007
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Entry
HVMH_1007 CDS
T06677
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hmar01011
]
HVMH_1007
Enzymes [BR:
hmar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HVMH_1007
Peptidoglycan biosynthesis and degradation proteins [BR:
hmar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HVMH_1007
BRITE hierarchy
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GFIT
Motif
Pfam:
LysM
SLT
LysM_RLK
LysM1_NFP_LYK
SLT_2
Motif
Other DBs
NCBI-ProteinID:
BBN59413
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Position
complement(1071955..1073628)
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AA seq
557 aa
AA seq
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MSFVQKYFFLLGCLVLPFVMNGCALTPLKSEPNASGQTSNSGDGDATTAENDDDADPKLP
IAMPSEMDDAESLSFEQTIQKATLEKYDLAETDTQRLKNFVHAPNTEENDNLWEVLSHNF
FLAPAHAEEYKSYIEYYLKRRKYLKRVSIRAKPYLYYILQEIKKRKMPYEIALLPVIESG
YYPFARSYVSASGLWQFMPSTGHLYGLQHNWWYDGRQDIYKSTQAALDYLQQLYVMNDYD
WLLALASYNAGLGNVLKAQRKYLKKHSNGNPNFWNIRRYLPQETKRYVPQLLAIAYLIDH
QSEYNIHLEPIENAPYFDDLKLTQQINLRNVAKATQTDLQLLKVLNPGFLRVATPPNAKH
RLLLPADIANDFRKQYEDNPEKFKVNWARHVIKPGESLLVIAHKYHTSASEIKKLNGLNN
NLIRAGHTLLIPVPKNQITAVRLAENKKKPYKGNKYYHTVRPGESLWTIARYYNVSTRTL
CEWNRISIRTPLRKGQKLEIRSNKYGKKFTYTLKKGESLWIVAQKYSVTTTELCNWNGLR
KSQVVQPGTKLDVWVKS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgttcaaaaatatttttttctgttaggttgtttggttttaccattcgttatg
aatggctgtgccttaacacctctaaaatcagaaccaaacgccagcgggcagacatctaac
tcaggtgatggtgacgctacgactgctgaaaatgacgacgacgcagatccaaaactgcct
atcgccatgccatctgaaatggatgatgccgaaagcttgagctttgagcaaaccattcaa
aaagccacactggaaaaatacgaccttgctgaaaccgacacgcagcgcctaaagaatttt
gtacacgccccaaacactgaagaaaacgacaacttgtgggaagtacttagccacaacttc
tttctagcgcctgcgcatgcagaagaatacaagtcctatattgaatactatctaaagcgc
cgtaaatatctaaaacgcgtttcgattcgtgccaaaccctatctctactacattttgcag
gaaatcaaaaaacgcaaaatgccgtatgaaatcgcattattgccggttatcgaaagtggt
tactacccatttgcccgctcttacgtcagtgcttctggtctctggcagttcatgccatct
acaggacacctttacggcctacagcataactggtggtatgacggtcgtcaggacatctat
aagagtactcaagctgccttggattacctacagcaactttacgtcatgaacgactatgat
tggttattagcccttgcctcgtacaatgccggattgggtaatgtactgaaagcccaaaga
aaatatttgaagaagcactctaacggcaaccctaacttctggaacatccgccgttattta
cctcaagaaaccaaacgctacgttcctcaactattagccattgcctacctaattgaccac
caatccgaatacaacattcacttagaacccattgagaacgcgccttactttgatgactta
aagctaacacagcaaatcaacttaagaaacgttgccaaagcaacgcaaacggatctgcaa
ctgctaaaagttttgaaccctggtttccttcgcgtggcaaccccccccaatgccaagcat
cgtttactgttgccggctgacattgccaacgatttcagaaaacaatacgaagacaaccct
gaaaaattcaaagtcaattgggcgagacatgtcatcaagccaggcgagagtttgttagtc
attgcacacaaataccacacctcagcgagcgagatcaaaaagctgaacggcttgaacaac
aacttgattcgcgcaggtcacaccttgctgatcccagttcctaaaaaccaaattaccgcc
gtccgtctagccgaaaataagaaaaaaccctataagggaaataagtattaccataccgtc
cgccctggtgagagcttgtggacgattgcccgttactacaatgtttcaacaagaacactg
tgcgaatggaatcgcattagtatccgcacaccacttcgtaagggacagaagctcgaaata
cgctcaaacaaatatggtaaaaagtttacttacactctgaaaaagggtgagagtttgtgg
attgtcgcgcagaaatactctgttaccacaactgaattatgcaactggaacgggctccgg
aagtcacaggttgttcaacctggaacgaagctagacgtctgggttaaaagttag
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