Hydrogenovibrio marinus: HVMH_1207
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Entry
HVMH_1207 CDS
T06677
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HVMH_1207 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hmar03011
]
HVMH_1207 (rpsA)
Ribosome [BR:
hmar03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HVMH_1207 (rpsA)
Bacteria
HVMH_1207 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RRP40_S1
CsrA
DUF5666
Motif
Other DBs
NCBI-ProteinID:
BBN59613
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All DBs
Position
1297256..1298929
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AA seq
557 aa
AA seq
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MSELSFAELFEQSLQEDKFQTGSLILGTVVAIDKEAVLVDAGMKSESAIPKAQFENANGE
LEVAVGDQVEVYLETLEDGFGETRLSREKAKRAKTWDRLETALENNETVVGLVTGKVKGG
LTVDVEGVRGFLPGSLVDVRPIRDFGFLEGKEIELKLVKLDRKRNNVVVSRRAVIEAENS
VEREALLANMEEGSTLKGIVKNLTDYGAFIDLGGIDGLLHITDMAWRRVNHPSEVIQVGD
EIEVKVLKFDKDKNRVSLGMKQLQEDPWADMVARYPIGAEIMGKVANITDYGAFIEIEDG
IEGLVHTSELDWTNRNIHPSKVVHLGQEVKVKILDVDQERRRISLSIKQCTVNPWEAFSA
THAKGDKISGSIKSITDFGIFIGLDGNIDGLVHLTDISWSQPGEEAVRDFKKGDELETVI
LSIDPERERISLGLKQLEQDPFGEFVAENGKNSIVTGTVKSVDEKGAVIDLADDVEGYLR
ASELAEDTRDASSVLKVGDTVEAKVMNVDRKNRTLSLSVKEKEAQEEANAIKDYSSSQPQ
AASTIGDLLKGQLSTDE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattatctttcgctgaattatttgaacagtctttacaagaagacaaattccaa
actggttccctaatcctagggactgtagtcgcaatcgacaaagaagctgttttggtcgat
gctggtatgaaatctgaatctgctattcctaaagcacaatttgaaaacgctaacggcgaa
ctagaagttgctgttggtgatcaagttgaagtttacttggaaacgctagaagacggcttt
ggtgagactcgtttgtctcgtgaaaaagctaagcgtgctaagacttgggatcgtttggaa
actgctcttgaaaataacgaaactgttgtgggtcttgttaccggtaaagttaaaggtggc
ttaacagttgacgttgaaggtgttcgtggtttcttgcctggttcacttgtggacgttcgt
ccgattcgcgactttggcttcctagaaggtaaagagatcgaacttaaacttgttaaacta
gatcgtaagcgtaacaacgttgttgtttctcgtcgtgctgtgattgaagctgaaaactct
gtagaaagagaagcgcttcttgcaaacatggaagaaggttctacgcttaaaggtatcgtt
aaaaaccttactgactatggtgcgtttatcgaccttggtggtattgacggtctacttcac
atcactgatatggcttggcgtcgtgttaaccacccatcagaagttatccaagtgggtgat
gagattgaagttaaagttcttaagttcgacaaagacaagaaccgtgtttctctaggtatg
aaacaacttcaagaagatccttgggctgatatggttgctcgttacccaattggtgcggaa
atcatggggaaagttgccaacatcactgattatggcgcattcatcgaaatcgaagatggt
attgaagggttggtgcatacttctgagttggattggactaaccgtaacatccacccatct
aaagttgttcacctaggacaagaagttaaagttaagattttggatgttgaccaagagcgt
cgtcgtatttcattgtctatcaagcagtgtactgttaacccatgggaagcgttctctgca
actcatgctaaaggtgacaaaatctctggtagcatcaagtctattactgacttcggtatc
ttcatcggtctagatggtaacattgatggtcttgttcacttgacagacatttcttggtct
caaccaggtgaagaagctgttcgtgacttcaaaaaaggtgatgaactagaaactgttatc
ctttcaattgatccagagcgtgaaagaatctctctaggtcttaagcaacttgaacaagat
ccttttggtgaatttgttgctgaaaacggtaaaaatagcatcgtaactggtactgttaag
tctgttgacgaaaaaggtgctgttattgatctagctgatgacgttgaaggttatttgcga
gcttctgaacttgctgaagatactcgcgatgcaagctcagttcttaaagttggtgatact
gtcgaagcgaaagtgatgaatgtcgatcgtaaaaaccgtacgctttctctttctgtaaaa
gaaaaagaagctcaggaagaagcaaacgcgattaaagactattcatcatcacaaccgcaa
gcagcaagtactattggtgacttgctaaaaggtcagctttctactgacgagtaa
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